Protein Info for mRNA_7917 in Rhodosporidium toruloides IFO0880

Name: 16285
Annotation: K18477 RMT2 type IV protein arginine methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 441 PF12796: Ank_2" amino acids 45 to 134 (90 residues), 35.6 bits, see alignment E=1.1e-12 PF13637: Ank_4" amino acids 45 to 95 (51 residues), 30.7 bits, see alignment 3.9e-11

Best Hits

Predicted SEED Role

"protein arginine methyltransferase type 2 (SDMA formation)" in subsystem Dimethylarginine metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (441 amino acids)

>mRNA_7917 K18477 RMT2 type IV protein arginine methyltransferase (Rhodosporidium toruloides IFO0880)
MPARLAQQPIHVSVPTSNSFDALAGDKDTAAQDDLDERVALALRLIDAVLDEDDRLVRML
VLEEKVDAWVQDQQGWTALHAAAYTGNVEHIKLLLRKSNAVWAMPDNLGCTAGDIAFSMN
HDRAYEELLAEGIRAEMLRSVLESAASSSDAEDPSAMAVDAEPSTSDAPKLSTASDNATF
LSSRLIFTADSRGQAVALDAEGNGVMMNWEEGIMRRTVEALAREGGWEGRKGRRREELVS
EEERGEREGLKVLNVGFGLGIIDTHLQSYAPTTHLIIEPHPDVLSFARQNGWFDKPGVRF
YEGTWKQWMGDLESGTEEYEGWDAVYFDTYSENYADLHRFFELLPDILSTSPSARFSFFH
GLGATSRLLYDIYTSVSEMHLREIGLKTEWEEVDVAQGVEGRWESTGEAGEGERTKGEGE
KKYWREEMVGRYRLPVCRLEM