Protein Info for mRNA_8009 in Rhodosporidium toruloides IFO0880

Name: 16377
Annotation: K02515 HSL1 serine/threonine-protein kinase HSL1, negative regulator of Swe1 kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 393 transmembrane" amino acids 245 to 258 (14 residues), see Phobius details PF07714: Pkinase_Tyr" amino acids 53 to 306 (254 residues), 137 bits, see alignment E=1.2e-43 PF00069: Pkinase" amino acids 53 to 311 (259 residues), 243.9 bits, see alignment E=2.9e-76 PF14531: Kinase-like" amino acids 152 to 299 (148 residues), 26 bits, see alignment E=8.3e-10

Best Hits

KEGG orthology group: None (inferred from 55% identity to lbc:LACBIDRAFT_244875)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (393 amino acids)

>mRNA_8009 K02515 HSL1 serine/threonine-protein kinase HSL1, negative regulator of Swe1 kinase (Rhodosporidium toruloides IFO0880)
MSASHQRDRERENGGAAAHQRVQQAGRSGGRPAGGSSHHHHREEPSMVGQWRMGKTVGEG
SSGRVKLAKHKLTGQYAAVKIVPKPRRKGDQDKVEKADKMLLGIEREIVIMKLIEHPNVL
RLLDVYETTHELYLIMEYVEGGELFDYLVRKKRLHADEARHYFQQIISGVDYCHRFNICH
RDLKPENLLLDKEKNIKIADFGMAALEREGRLLETSCGSPHYASPEIVAGENYHGSSSDI
WSCGIILYALLTGVLPFGHADIRTLLSLVKRGEYYMPPELPRDAQDLLRRMLVVDPEKRI
RMDEIRAHPWVTRKPPRLIYGVPPPAPPDVNQIARPVGSVDEIDPEILGNLRTLWQGASE
REIVQELLSPEKTWEKVFYCLLYRYRTRSLENY