Protein Info for mRNA_8083 in Rhodosporidium toruloides IFO0880

Name: 16451
Annotation: K17774 MDM10 mitochondrial distribution and morphology protein 10

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 503 PF12519: MDM10" amino acids 3 to 411 (409 residues), 218.5 bits, see alignment E=8.7e-69 amino acids 426 to 501 (76 residues), 42.5 bits, see alignment E=2.1e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (503 amino acids)

>mRNA_8083 K17774 MDM10 mitochondrial distribution and morphology protein 10 (Rhodosporidium toruloides IFO0880)
MSQQAAYLLREFLLATNWNTWDNHYASLTHPSRQLLDFSIPSGLHFAVASHPTLNFTPGV
NLSSLVPEVPVTYPPSPAPVLGPPVSPLLAGQLSYLFSSAPISATSSKRAAEGDARIRFK
DVVQSFPFGTIPVRPELRDDALPTWKGGERVDKADFLLYGRLYVPNPRLDALYVHRLSPT
LQALVSLITVPSPAPPPTLTWENTDPAASLSASTSSVAGASGPTSGPLARLSELELKLQQ
NTGRWSTEYSYAVGDGMWGVRGLYNFGRWGEPGAASTAVPVSPSTGGAGPETRERAVDEE
DEMPAGLKGRWSAGGEIYFSAQERSAGVSTGVRFTTIPESAGGPPQPPTYISATINPIMG
QLSTAYAVQVGRDASLASRFDFNLYSYDADLTVGGEWFQRRTPAKGKGREEEYKAGATFD
AFGRGADDEETKRRRKNNDAEDEVLGVLKVRASTNADVAMLWEGRLGDFIVSAGLVADIR
LATQSRGRISPIRSIGLSASYWA