Protein Info for mRNA_8084 in Rhodosporidium toruloides IFO0880

Name: 16452
Annotation: K05351 E1.1.1.9 D-xylulose reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 PF08240: ADH_N" amino acids 45 to 155 (111 residues), 91.1 bits, see alignment E=8.3e-30 PF01262: AlaDh_PNT_C" amino acids 181 to 231 (51 residues), 24.8 bits, see alignment 2.5e-09 PF00107: ADH_zinc_N" amino acids 196 to 341 (146 residues), 84.4 bits, see alignment E=1.4e-27 PF13602: ADH_zinc_N_2" amino acids 249 to 371 (123 residues), 36.4 bits, see alignment E=2.2e-12

Best Hits

KEGG orthology group: None (inferred from 59% identity to cci:CC1G_00399)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (392 amino acids)

>mRNA_8084 K05351 E1.1.1.9 D-xylulose reductase (Rhodosporidium toruloides IFO0880)
MTAPTSSNSANEDISVPPHNPAFVLHGIQDVRFEDRPLPEECGEDEAIVAPKATGICGSD
SHYMCHGRIGDFVVNAPMILGHETAAVVVKVGKNVKNVKPGDRVALEPGKSCRVCSECKG
GHYERCADMIFAATPPYDGTLAGRYILPADLCYKLPDGMSLEEGALLEPMSVGVQAVAKI
GDMKPGANVVVFGAGPVGLLTAAVAKGLGARFVIAVDIQEDRLQFAKEKGLVHDIYVPSK
PNQGEDKVDYQRRNAAEIRQKFGFEERGPQGVDLVVDCSGAEVCIATGVFLLRHGGTLVQ
VGMGKPDITLDMHTILTHELTLKGSFRYGPDVYRLALDLVARGAVNLSALISHRYPFAQA
KEAFKANQSGKGDDGNGVIKIIIAGPTANDKF