Protein Info for mRNA_8095 in Rhodosporidium toruloides IFO0880

Name: 16463
Annotation: K17508 PTC7, PPTC7 protein phosphatase PTC7

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 618 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF07228: SpoIIE" amino acids 355 to 518 (164 residues), 36.2 bits, see alignment E=9.5e-13 PF13672: PP2C_2" amino acids 355 to 523 (169 residues), 39.8 bits, see alignment E=6.3e-14 PF00481: PP2C" amino acids 365 to 460 (96 residues), 21.9 bits, see alignment E=1.9e-08

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (618 amino acids)

>mRNA_8095 K17508 PTC7, PPTC7 protein phosphatase PTC7 (Rhodosporidium toruloides IFO0880)
MSKSPKALLPSSLTLSTISRALPTSAATGKYSVRTVALAVGSKAAGKGQAPGGFIVVRQR
RASPFAGAVSSSARSGGAGQAGGSGQAGPSRQAAGSRGQVNAVRRSGGLLRTGGGVSTSA
SSSSGSRALAGYFGESASSSRGFHTSSRTTHQQAVAPSSSGIAPPPGGAGGAGAGGVSPP
GSSAAEGYPFHPKHHSSLATPSHDGPLLLGPSAGQGGHGTSLPTVVDLSSSSPISSQSTH
ASSSKHIPATFFTQPPPASFPSHALPAFFGSALNIARRSNLVFRNGAYGIPKSEYSRARK
ASDKGKEKVIVDEEEHYLSVGVGEDSVRFVPRFWNARLADGAFVRQYFLRSDSLGVADGV
GGWSHHAGANSARWARKFMHHCSAELARYENIDDELFLRYYEVDPVDVMQRAYEKTLHEC
KEEGTIGSSTALLAILRNDELRLANLGDCSCFVIRGDEYVFRSEEQQHRFNYPFQAGTNA
KDTPAKDAQRFNVKVRRDDIVILASDGLVDNVFSDDLLEEVLRFVGTNPPTVPSPPSSSN
GSPSSKYTLRRFSPQAVSEALCFRAKSVYEDQRAVASPFQQRAMEEGIHYAGGKIDDVSC
LVGVVGELEAAPNRRDVQ