Protein Info for mRNA_8108 in Rhodosporidium toruloides IFO0880

Name: 16476
Annotation: K17637 EXOC2, SEC5 exocyst complex component 2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1024 PF15469: Sec5" amino acids 208 to 405 (198 residues), 161.5 bits, see alignment E=1.1e-51

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (1024 amino acids)

>mRNA_8108 K17637 EXOC2, SEC5 exocyst complex component 2 (Rhodosporidium toruloides IFO0880)
MQSRSYTRPVQQEPQDFDPRQPLPPHSTQRPSHDSERYRRPSSSASERDPRAEMRRQGSG
HSGLSVQTGMSGRDGAPPSPKPQDWEANEEAMLELYGLSTLAPTHWEAGETADSASVDSP
KDGFTGATGTAKVAGAPKGDESDPLGLMRGGILANNPDLPSDLRSAVLPHSKSFDPKVFL
STVHPNATFKDLNVGRERLKESLEKRSGALKLLVEAEWDRFVAVKAATETVFEEMKDGGP
LTPGEDYGVKSMRDTLKAASSRAETVFQPIVEARTKAERLKSTLGVFERSKFFFNLPTIL
GEAVEEGRYEVALQAYKKGRYILASRPAQLLGLPVPTTPQQQQQQKRIYDKVWGQVEKII
GDLRATLGKRLRDTKRGLDEVEKTIEILLELDPSDDPVWIFFDTQHRHILQLLRSSADSS
MSRIRIAMDQFGEAEENDRKQAADLGTGVASLQSLDGERVRENAAGAEVWRLIFDFVRNL
NEVIMQTLPSFWKVAKGYMEGKYQKKNTSSSAASRRSPTQCRVMTQDIVTLYVSLLSQFF
TLSSSTSPPVATKTGADDLNATPPMPSFVPPIANATTNCHWLLRVLNELMECVSEMSALE
LSGEATQSLKELVASTRWRFEEAICSGWVRDAKVFYRLETWRPDPDDPAITAFLRQVTSF
QRFMAISAYRVAGGSEERGNALMGSSSSSSSSNTASRNRQDVTIPTDFQRKIQSAFLDGL
YAFLDGLVHVAFSDPETIYSSPSGTKRRGLGIEADDDTGRPKEVDIRNVDIRILLTVSNL
THLRETTIPRLINQFQSAYKVDMASDIQMLMDVTEQLDKILFDDYVKRKSAEIAKIIRKG
VLGGTVNWYEADKPTEVHPFIYDALLSLVLVHAQVSATARPLVSRTLGSLVEELANVALE
AFSKVERFGMGGMLQATLEIEFMHQTLSQHVSPLADQTLQSIYKTISQSYYRRPNSSAQE
LQQELEGLKRTLVASRRATALQFLCFRRPSKQPAAPPQTTSGKVIDGGAAAQEPKTRRGA
VVGA