Protein Info for mRNA_8167 in Rhodosporidium toruloides IFO0880

Name: 16535
Annotation: K04350 RASGRP1 RAS guanyl-releasing protein 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1269 PF00618: RasGEF_N" amino acids 741 to 825 (85 residues), 35.5 bits, see alignment 1e-12 PF00617: RasGEF" amino acids 992 to 1196 (205 residues), 139.4 bits, see alignment E=1.5e-44

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1269 amino acids)

>mRNA_8167 K04350 RASGRP1 RAS guanyl-releasing protein 1 (Rhodosporidium toruloides IFO0880)
MSPSNGFEGFRNDEADQMRATTNLAASPLPALPDELLAALAREPPPAGSTRTSLAYDRPE
SHLESTSHSPFSLSYPLSSSASPPQPPTFQPLPPDQPSATGYSSYRTASATPNSTLGGMA
SSKSATHSPPIPTPSPSRTRTMLRSLPFGTSARAKASTPPTVPSPAQQYTVPSPRAYHLP
PNLSPAQEEAFEFDRTPAVTTGDQMPGSAYESRPSRPRTQTGSSSISNTPSSGSINSRIP
PAIVLAAEMSRADSSGSGRAPRSPVDGDAAEEHWRAIVAAGGRRGSALAEEYTRDLSLGR
GELEGAKLVEEDDEGEEEDIDGSLRDLQRELAELAVQPTIPTRRPSVFSLRHQLATLSVD
PLHYDSAAARPQATAQAVEGGPSQHTAEPTLLEDQHIIDPVSPVSAADFIVAVVGPRHVG
KSSVIRRGLKRPLADPFVLHEDEQGNRVTTSTTSFSIGGQRRTIEVLEIDEGMLRYSEEG
VVWPDGLPQCEAAMLCYDASNANSLDSLSTLLKAFWTRGSDVPLIVLACKSGGPSASQPD
AADPRLAANICNVYGAGIVQLDGGLEDPQRKAKECFNWVIRQIMDNRGEPIVSVPNSPTS
SRRDSVQRGITSSAYATTPDVAIRRPSASGPLTLSVVEESPVTAEVQRSAQEQAELEAAD
AEADAAVAALLAATGAVDDDDAKLSAEPRTETRGARPRTPLYVSATPAELDGKLQVGEVP
PPPIERRGSKTTSMDLFFRREDLIDKFLFAAVAGNDEQFVTLFLITFRRFARPYDVLERL
IERFDFVAQQQQTDPLLCRYGQMRLCGILSTWLQTSPGDFAAPATFGLLQPFLESLLPRG
ATWVAHYAFELVPLLAPISSMSDPESGWAIPDKTADDSPSLSPVTPRPTMPERRPSHAPS
SASSGSLAPARPEAGQAASLVPSTSAGGSADVMSYDGTPMSRQHTTSDVGTVETQASSAG
TGASTEALTRTMPSSAVLVDFSNAILEMREQDIATQITRITWQAFSGMTPRDLMRHVLAP
RDPSNPSVAFRVADGCVARSIGFVNHLANWTSTLILVQSRIKARARMIEKLLSVAVELRQ
QENFDALMGVLAGLNAQPIFRLSETFDLVTSKLDGDARLQPQRAIQPDGDSQRLPKKLRS
LNRLMSASKAFAAYRLALANSGITMIPYLGVHLQDLTIVNESKSDRRDGLVNWSKFSQLG
KSAAIVLDCAKVAPKLPVDKTIERCILDVPLLDEDRRYTLSYAHQPRGEGKTGTRSRLRD
LAKSTFAAT