Protein Info for mRNA_8240 in Rhodosporidium toruloides IFO0880

Name: 16608
Annotation: K14350 AADACL2 arylacetamide deacetylase-like 2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 999 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF10340: Say1_Mug180" amino acids 263 to 386 (124 residues), 36.9 bits, see alignment E=3.2e-13 PF07859: Abhydrolase_3" amino acids 270 to 393 (124 residues), 114.5 bits, see alignment E=1e-36

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (999 amino acids)

>mRNA_8240 K14350 AADACL2 arylacetamide deacetylase-like 2 (Rhodosporidium toruloides IFO0880)
MEGLPMNTLTVTLSGLSTIGKTFLKHYVHRKKITKQTKARESLTYDEAFSVMKNFFENAS
MHTVEDVQRFGNNFVPAPFWVRVIRVVIPLSTRLEAGKVLIDTLGEDEIERVVGGREWWQ
RTTHKEGGVDGEWISMKRDWEGLEAESRTRSKEKGEDKARTRRKKDDEAEEKTKQLKEDA
KVENRRRRELGKARKAFPPSWTTASSSKAQSTTDLEKQAEDEAAARQRAADGSPSDSPKQ
PAGAPLDSEASSCHHEDDDYTAELDDMPVMLAIHGGGYFFGSINTHRYIYWRLARKTGGR
VFAVEYRLSPQYPFPCSLHDCLAAYLYLIRPPPGAKHRPVDPSKITICGDSAGGGLAIAL
LCLLRDGGLPMPAGGILISPWCDLTHSFPSILQNTDTDIPPPFGFAIFKPSTLWPPPPAE
FRKRADESTSLQGLKKAAHHLQHTGSRGSNEPHTTTSEKQEKSERHGHHFPTLSTHHKAH
ELADAVERLPDNDPKRAEQHNGDASSPSDETGASGQHKTEVSKVMKVKVDGKEVELVDQI
QLYATNEQLVYPFVSPIWQPSLGGLPPLYVMAGDKEVLRDEIIYMAHRAAHPDRYPVREG
ILKQNPDRARKTKDYPPTKVHLQLYDEVCHDLPLFSFTTPAKYCFRAMASFAKWVTTPSD
QQPSAVSPSGMTLPLERDPLHPDSAFLRPPDADGSSTLNGSAASIRTSRTDAGRSQSVPT
TSATSVSSVPLPGKKAKKHSAPPAIDLEKTIYSSTQPFNRPEYVDNMIRERISTTGVVRP
LEPEDQMSMLKVDKEDVGLIKEAPVKRYLAGSESSAPRQLVRPAHASRLPAEAILERKFR
RTYKSVQKERERHLKKSMREEAARITKRAKELAKQHSGQGSNSPSSRPNPDAVDPARPPR
TDSPEPLDGNDESAFAGLGGAWDLHGENPPPSSLAGRKDTLEARKLAKVLDEHYSRVSAL
HLWTGFQDVFGGTPRQESQDVNGDAPPVSVQLGASSRPT