Protein Info for mRNA_8361 in Rhodosporidium toruloides IFO0880

Name: 16729
Annotation: K06640 ATR serine/threonine-protein kinase ATR

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1591 PF08064: UME" amino acids 65 to 165 (101 residues), 83.7 bits, see alignment 1.6e-27 PF02259: FAT" amino acids 738 to 1050 (313 residues), 117.9 bits, see alignment E=1.3e-37 PF00454: PI3_PI4_kinase" amino acids 1266 to 1513 (248 residues), 171.4 bits, see alignment E=6.7e-54 PF02260: FATC" amino acids 1567 to 1591 (25 residues), 32.1 bits, see alignment (E = 1.6e-11)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1591 amino acids)

>mRNA_8361 K06640 ATR serine/threonine-protein kinase ATR (Rhodosporidium toruloides IFO0880)
MRECRGVVLAKLLESINIPLVYKLALELGDEDQMVAAQAERGLKAVERARLGHAASAHID
PAHVLKNAIVGILSHMNRGLHEAGHQRPLREKQKIIRSLDAITRMVGRAIAGFSPQIMAT
LQTALELPGLRLVTLNAFRAFLQSLKFSDIGAFIGPTTAAFVRLWPDLTNLERASAAKTI
HYLVVENVDSLSQHVKDVADLSGIPELAQADRRLQAARRGWSLFDWLRHLLDRIASENDV
VTLQALRELKVVLAKNVASIQALATGDTFDPAIGRLVSVLLSAAVKDSPENESIRNVAFE
CIGILGAVDPDRFELPPVEPPPVVLENFDDRSEAIDFAIRLIEDLLVGAYRSTNDTKHQE
MLAYAIQELLRFCGFTEDLIISPQTAAHVDPLTLHRWQKLPKTVIEACAPLLSTRFSLAN
DRAMQPATFPIYLSTTVYRDWIRAFANELLKGVRGETAGQVFGAFSGLLHLEDTAVAQHL
LPHLVLHVVICGSDEDRLNIKKEMETVLTDQVSPTHTLSENSRLLAAQTVFSLMDHVSRW
ITLARKRLADAKALRKKTKSKPAPIESKITQQLGDVEGILQDIPHILVGQAALTCKAYAR
SLLNFESHIVAQRAQKGLDVDKDLQVYYENLHECYAHLDEPDGMEGISTKILSPSILHQI
REHESTGRWTSAQSCWEVKLQQKPDEPGNHVGLLRCLRNLGHYDSMRTHIAGLLHGRGDE
VDWERILAPFNIEASLFVGDWDAIEDVLEVPGVEGAEAAFGRVLSAIRTGDRDLVERAFY
EAREQLGGPLVAAGRESYRRVYDSVVHLHILDELSLINELQVASTKELPACFETLKNRLD
ATSPSFRAREPILNLRRTALRLTLPHEQAAKTEVGNLWLETSKIARKAGHFQTAYSAILQ
ARDYDAEYTFLQSAKLFKANDQPFKAIQELDNRLKPILARFNERDPNDPLISHDKPGPIA
KAALRRARWMQEAGRLDQNEAVSLYNEATALAPNWETAYFHLGRFWDRMAQEKEKKQPKH
KQGRYTGSLYVRSLACGTKYIYQALPRTLTIWLEMGERPALYFTRCNGYIRKAAVQQPLP
AYLWLTVLPQLVSRILHANETLYDVLEQVLLKVLSTFPHHGFWAMASGAKSNTNRRSRRN
MRIFQKAKEAAAAKHASDVGAIVDEGLRLVDQLLVLCNFPINGKVDTLSLKKTFPQLYKT
APCKLIIPLQSSLTVSLPFDASQAAAHKPFPDSLPVFQDFDDQIVVMSSLQKPRKITVRG
DDGRFYSFLCKPKDDLRKDARLMEFNAMIIKLLKKDSDARSRKLNIRTYSVVPLNEECGL
IEWVPHTVVLRGLLNKSYLSRGIASWSPELKRIFDSIRDDQKRIGERFDKEVLSMFPPVF
HDWFLETFPEPSAWHRARLAYSRTAAVISMVGFVLGLGDRHCENILLDATTGETVQVDFN
CLFDKGRTFEVPEKVPFRLTQNIIDGMGVTGFEGQSGVYRRACEITLRILRANRDSLRSV
LETFLHDPLVEWVYVSKKVSCAAQREAGTGPEQTRARALEALEPIDNKLLGLQVTSDPES
IGVKEVSVEEQVERLIREARDSKNLGAMYVG