Protein Info for mRNA_8368 in Rhodosporidium toruloides IFO0880

Name: 16736
Annotation: K07119 K07119 uncharacterized protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 340 PF16884: ADH_N_2" amino acids 28 to 114 (87 residues), 62.1 bits, see alignment E=6.8e-21 PF00107: ADH_zinc_N" amino acids 168 to 289 (122 residues), 67.6 bits, see alignment E=1.7e-22

Best Hits

KEGG orthology group: K07119, (no description) (inferred from 44% identity to fgr:FG00150.1)

Predicted SEED Role

"Putative oxidoreductase YncB"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (340 amino acids)

>mRNA_8368 K07119 K07119 uncharacterized protein (Rhodosporidium toruloides IFO0880)
MVQNASLVYAEPPTGAPVPGETLIRRVDEIDIDNVPLEGGILVQNKALSLDPYMRGRMRD
PKLKSYNEPFELNKPLTTLAIGLVLRSDEPTIQPGSIYKGRFDASEYALIPGKLVKLLGR
VVENKEGLPWTTLLGACGMPGATAWVGLYDIGKPKKGETIFVSAASGAVGQIVGQLAKRD
GLFVVGSAGSDEKVAFLKEIGFDVAFNYKTDSTQEILEQHPPDIYWDNVGGETLDTVLAT
IKPKGRIIACGSISQYNKPRDQHYGLTQTFQVVTKSLKWEGFIVSNHDTTEFDRVMPGLV
KSGEIKIKEHITKGIDQGEAFVDMLEGRNFGKAVISLSDD