Protein Info for mRNA_8407 in Rhodosporidium toruloides IFO0880
Name: 16775
Annotation: K18914 FDXR adrenodoxin-NADP+ reductase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Ferredoxin--NADP(+) reductase (EC 1.18.1.2)" in subsystem Biogenesis of cytochrome c oxidases (EC 1.18.1.2)
MetaCyc Pathways
- 1-butanol autotrophic biosynthesis (engineered) (18/27 steps found)
- NADPH to cytochrome c oxidase via plastocyanin (1/4 steps found)
- photosynthesis light reactions (1/4 steps found)
- ethene biosynthesis V (engineered) (16/25 steps found)
- oxygenic photosynthesis (10/17 steps found)
- superpathway of photosynthetic hydrogen production (2/6 steps found)
- photosynthetic 3-hydroxybutanoate biosynthesis (engineered) (16/26 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.18.1.2
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (533 amino acids)
>mRNA_8407 K18914 FDXR adrenodoxin-NADP+ reductase (Rhodosporidium toruloides IFO0880) MLRTRCLLLESASTLRWTRPPRSRGLATAAAAARPFRIGVVGGGPAGFYAAGRLLSVADN ARVDLFELLPTPFGLARFGVAPDHPEVKNCEHKFEETARDPRFRFFGNVQVCGTQASSDS TVLSVPNTTPSSLAVPIPLEKLRQHYDAVLLTYGASLDPPLGIPGEDTLNNVLSARTFVN WYNGHPHHSSLLAPLIDLSKLEHATIIGQGNVALDVARILLKDVDALREYDVPDHVLAEL ARSRVKRVNIVGRRGPLQLAATTKELREMLNLPGVGFDIDSQILSDAVRDVEAYPKVEGA RAKKRAMGLLAGGSKTPLAEASKSWSLQFLQSPVELLPSLAEGATAPSALEGIASPQSIG AVRYTLNELVPPASSTSPDPSQFSARATSESRIASTDILFKSVGYRSIGLPGLPFDERRG IVRNDQGRVVDEQGQRIEGLYTSGWLARGPTGVIATTMFDAFATADLVAQDLALAGSVEE KPEFRIDEYSGGKKVVSWEDWEVIDRIERERGREKGKLREKMVSVEEMLGVVG