Protein Info for mRNA_4 in Rhodosporidium toruloides IFO0880
Name: 8372
Annotation: K00772 mtaP, MTAP 5'-methylthioadenosine phosphorylase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 59% identical to MTAP1_PUCGT: S-methyl-5'-thioadenosine phosphorylase 1 (PGTG_06409) from Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL)
Predicted SEED Role
"5'-methylthioadenosine phosphorylase (EC 2.4.2.28)" in subsystem Methionine Salvage (EC 2.4.2.28)
MetaCyc Pathways
- S-methyl-5'-thioadenosine degradation II (1/1 steps found)
- 5'-deoxyadenosine degradation I (2/3 steps found)
- L-methionine salvage cycle III (7/11 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.4.2.28
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (354 amino acids)
>mRNA_4 K00772 mtaP, MTAP 5'-methylthioadenosine phosphorylase (Rhodosporidium toruloides IFO0880) MPSVSPSHYTMDNAPLIGVIGGSGLYKLDNLEIVKTVNPVTPWGPPSSPITIASLSTPEG PVTLAFLARHGPHHNIPPSNVPSRANIAALKRIGVKAIVAFSAVGSLREEIRPGDIIVPD QIIDRTKGVRPSTYFDRTMVGHAMFGEPFDVQLREFIVPHVKEAINTFKGHINPSDEPRL HTKKTVVVMEGPQFSTRAESNMYRLWGGDIINMSALPEAKLAREAELSYALVATSTDYDA WRVDAAPVTVEEVMKTLRTNAELSKHITASILGAVHTAVKSGQIQGQTGQMQYSLMTPHK EVGAEELHRLTYLLPNYFNYPDPAAERRSRSRARIDVDMDDYTGGEEHAPRGRQ