Protein Info for mRNA_120 in Rhodosporidium toruloides IFO0880
Name: 8488
Annotation: K10413 DYNC1H dynein heavy chain 1, cytosolic
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (4364 amino acids)
>mRNA_120 K10413 DYNC1H dynein heavy chain 1, cytosolic (Rhodosporidium toruloides IFO0880) MQDRRPSSPAVDGAESPPTATPGPRNQFDLAAFRKYLGQLLPLLIEAESADLESLFERSD FSERATRWANDPNAGALYVVKQREERDADEQQDDSLLDTFTYSLTSSLSYSPLQSATLAL IKHVPILDSSLPLASQLHFLNLFGPASSSSSSNALVAGATAGSVVYEGLHRLVHYGVAPA FEAYVESKARKDAAGRAVEDSKDADVKMGIPMTKKKFAELELSLLHLQQNVEIPDIVLSI HPVVSAAVSQAEASGIRPFVDLIDSALFSDSAFLNKLQSEVNNWVKEVQKVTKLSRDVAS GTASQEVNFWLSMEKALEGIEKQLKSEPVQLSLDILKHAKRFHATVSFIADTGLNDAFKT VHDYNVLMKDFPLNELLAATDLNKIKDSINQIFLHVNKKLKLSPYPVRRILPLVEAISRD LENQLHKVLSSQRLTYLDYPLFEQAMRAAEGVFQAWDESFKEFTNVAREVTRKRGERFIP IKIDPGHAKLQERVLYFRHFRKQHHQLQVMVGPLSSETKRSTAVNGDGAKENGDVDGELA REWSSTLGDIDMEVEVRQAYEGIKGIDVLDVSDDGTQIWIAAETGYNERVARVENHIISR LRDRLGGAKNANEMFRVFSKFNALFVRPKIRGAIAEYQSQLIDSVKDDIRRLQDKFKSGY QSSEAYQMSQLRDHPPISGAIIWARQIERQLSGYMKRVEDVLGTEWSHYADGQRLQTESQ SFRAKLSTRPIYDAWLVDINRRNLQISGRLFNITKSRQQAGALQLTVNFDPQIITLFKEV RNLLWLGFQVPHTISNVAKDAKRVYPYAVSLMETVRTYSQTVAKLEANPDIASLVATSHK KAQEQIAKGMSYRWDHFVNTFDNRSLPYAGASESSGSKHTHWVREFASIVSEFQDRTDHL IALWADVSRTVDELGTCAYTREAFSTLLASLQKTIDTLNLEGYANLESWTLALDKRVEAK LVGRIRAVIERWCGEFSKTPEALAAESNRYGASGKKAAAARDNQPEDGLPLETILHEVRI QNQVIYLDPPMEQARATWYRQLQTWLGVVCGLTRIQSSRYEIGLSIRAAQPGALDYSTLL ASLTDGTLERPFALVEAKLEEVGGYVDKWLQFQSLWDLEAEYVYSQLGDRLSAWQQLLLE IRKTRSTFDNSETQRSFGVAVIDYEQVQSKVNAKYDAWQRNLLSRFGGKLGVAMKETHAA VAKARHDLEQHSIETSSTAATVTFITFVQDVKRKLKQWAPEIEIFSSGQKTLERQRYQFP SDWLYLDQVENEWSAFNEILKRKDASIQEQLAGLQLKVVAEDKVLQGRIEETVADWDANK PIQGSLKAEAAMNAIGVFEGRVNRLKEQHDMLSRAKESLDLEATKDDRLEPVLEEIRDLK AVWTALSGVWAQVGDLRDTAWQSVQPRKVRQQLDSLLASTREMPSKMRQYAAFEFVQESL RGYLKSNSLVANLKSEALRERHWRQLYKSLRVAGHYSPSTMTLGTVWDLDLKRNETAIRD VIVQAQGEMALEEFLKQVKETWTGYALDLVNYQNKTRLIRGWDDLFAKCGENVNSLNAMK LSPYYRVFEEEASAWEDRLNRIHLLFDVWIDVQRQWVYLEGIFSGSTDIKHLLPVESQRF SNINAEFLAVMKKVFKSPLVLDVLNIPGAQKSLERLADLLSKIQKALGEYLERERSSFPR FYFVGDEDLLEIIGNSKDILRVSKFLKKMFAGLSSLKLDDELSRIDGMVSREGEEVPFST PIVLSEYPRINDWLARLESEMKTSLAQLLARSHADLVAFYADPAGLDAGRFLRWIEATPA QLVVLAIQIAWTDGVESALQAGGALDRPLAVILRSLEVLADAVLGDLQPIQRRKCEHLIT ELVHERDVVRRLAQDGVQSAADFAWLYHMRFYLDVGKENVLEQLQVKMASASFFYGYEYL GVPDRLVQTPLTDRCYLTLTQALDARLGGSPFGPAGTGKTESVKALGVALGRFVLVFCCD ETFDFQAMGRIFVGLCQVGAWGCFDEFNRLEERILSAVSQQIQSIQLGLGETVTNPSHEI ELVGRQLRINPDTGIFITMNPGYAGRSNLPDNLKKLFRSIAMTRPDRELIAQVMLFSQGF RTAEKLASKVVPFFNLCAEQLSSQPHYDFGLRALKAVLVSAGHLKRARLQAVTNANGSES VDISEQEIVIQSVTETIVPKLVAEDVPLLTSLLADVFPGIDYIPVDLEDLKKHILDICKE RNLVAGDVWLQKVVQLYQIQNIQHGLMMVGPSATGKTSAWRVLLAALERLTGIEGVSYVI DPKAIAKDALYGTLDPTTREWNDGLFTHVLRKIVDDVRAESSKRHWIVFDGDVDPEWVEN LNSVLDDNKLLTLPNGERLNLPPNVRIMFEVESLKYATLATVSRCGMVWFSDDAVSPDML CRNYLDATRSTPLDVADEDASFARQPQSDGDEVSAVLATQQLVTAKLEPFFERDGLVAKA LDFAAGVDHIMDFTPSRALTTLFSLLNKSIRTIAEYNAQHPDFPLQGDSVEAYILKRLLL GLVWAFTGDSKLDTRAKMGDFLRNQSGLDFPPLGPGGSLIDFDVQVSTGDWVSWQNSVPT IEVETQAVTSPDVVIPTMDTARHEEVLYSWLSEHRPLLLCGPPGSGKTMTLFSALRKLPD LEVVGLNFSSATTPDLILKTFEQHCEYRKTPNGVVLAPTQIGRWLVLFCDEINLPATDQY GTQKVISFLRQLVEQNGFWRTTDKAWVRLENIQIVGACNPPTDPGRVPLTHRFLRHAPLV MVDYPGETSLKQIYGTFTRALLKVVPPLRGFAEPLTDAMVDFYLASQARFTTDAQAHYVY SPRELTRWTRGIYEAIKPLDALSVEGLVRVWAHEALRLFQDRLVTEEERKWTDDKIDEIA LAHFPTIDRDEALARPILYSNWLSKHYVPVDREELREYAKARLRVFYEEQLDVPLVLFND VLDHVLRIDRVFRQVQGHLLLIGTTLSRFVAWMNGLSVFQIKVHNKYTGDDFDDDLRAVL RRAGCKGEKIAFIMDESNVLDSGFLERMNTLLANAEIPGLFEGDEHASLMTACKEGAQRD GLMLDSHDELYRWFTSQVARNLHVVFTMNPPSGGLASRAATSPALFNRCVLDWFGDWSDQ AFYQVGFEFTNTLDLDAAGYTAPANFPTAYRQLSVPPVHRTAVVNALVHVHQSMYESNAR LARRQGRVNHATPRHYLDFVNQYVRLFNEKRDELEEQQRHLNVGLDKLHETVVQVEDLRK SLAVKRTQLEAKNAEANDKLKRMVVDQQDAEQKKVASIEMSTALEKQKHAIAERREIVMG ELADAEPAVEDAQAAVSNIKKQQLTEVRSMANPPEAVKMSMEAVCILLGHRIEGWKSVQA VLRSESFIASIVNFDTAHMMTRQLRDKMRNDYLSRPSFNFETVNRASKACGPLVKWVIAQ VNYSSILDKVGPLREEVQMLEDQAETTMHQASALSSMISELEARIAAYKDEYAALISETQ AIKSEMERVQTRVDRSVKLLDSLSSEKSRWEAGSKTFEEQMSTVAGDVLLSAAFLAYAGY FDQSNRQAMWQGWANHLSDAGIKYKPELSLTEYLSTADERLEWHGRGLPTDELCVENAIM LKRFDRYPLVIDPAGQATSFLLNEFRDRKITVTSFLDEAFLKNLESALRFGTPILIQDVE HLDPILNAVLNKELRRAGGRVLIRLGNQDIDFSPSFTMFLATRDPSVEFAADLNSRVTMV NFSITRASLQTQSLAQVLKVERPEIDRKRSDLLRLQGEFRARLHQLERSLLAALNGSQGN ILDDDKVIETLETLKKEAADIMRKVEETDTVMAEVDEVTNEYLPLAQACSSVFFILDDLH LLNRFYQFSLRFFLDIFDYVLLNNPSLKGIADAHERTRILFDDLFTHVFRRTSRALLHSD HLTLAVLLAQIKLRGQGEELDEQELSFLLEGGETTAATSTTASIAILDPTQQQRLQAFER LGVFRDVRSNLVEREGDWQTFLASAAPETVVPQVWPELDPVHAALRNALIVKCLRPDRLI PALTAFVAVVFKRDLFAETTYDLSDMVQNEVAAASPVCLCSVPGYDASYRVDNLVAATSA RCTSVAMGSQEGFALADQAIAASARTGNWVLLKNVHLAPTWLSQLEKRLQSLNPNRAFRL FLTMEMNPAIPVNILRQGRVLMNEPPPGIRANILDSLRTLNPARLAHGPAEKTRLYFLVA WFHAVVQERLRYVPLGWSKVFEFNDSDQDAALNTIDAWLSSAAKGRANIDPAAIPWQAIR SLVRETVYGGKIDTEFDQSLLDSFVETLFSPRAYEVDFDLVSSGENEAGLKVPDAVHLDQ FLEWASQLPEQEPPSYLALPPTAERVIAAAQGTFGFKSLSQPFS