Protein Info for mRNA_208 in Rhodosporidium toruloides IFO0880

Name: 8576
Annotation: K19270 yfbT, yniC sugar-phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 252 PF00702: Hydrolase" amino acids 8 to 199 (192 residues), 44.3 bits, see alignment E=4.1e-15 PF13419: HAD_2" amino acids 11 to 206 (196 residues), 71.5 bits, see alignment E=1.5e-23 PF12710: HAD" amino acids 11 to 158 (148 residues), 33.2 bits, see alignment E=1.1e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (252 amino acids)

>mRNA_208 K19270 yfbT, yniC sugar-phosphatase (Rhodosporidium toruloides IFO0880)
MPSVELTVKAILFDSDGTLIDSTPAVKRTIARWCAVQGVDPREFAAAQHGTRAKDLLRRF
ATTPKKGSEMSEEELDAAVEELEKSVGETARQMKAYGEGSGIVALPGVLELLATLQGGGA
QWGIVTSATRIHAVPALELAGILAPPVMVTGEQVSTGKPSPEPYLIGIDRLRDLQPDLMP
LDVLVVEDAPAGFESAYSAGARLLAVCTGPVEAAEVRNAASKVNGAVVVKDLTAVSVIRC
SSESITLRVFVV