Protein Info for mRNA_212 in Rhodosporidium toruloides IFO0880

Name: 8580
Annotation: K01194 TREH, treA, treF alpha,alpha-trehalase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 663 PF01204: Trehalase" amino acids 53 to 636 (584 residues), 516.7 bits, see alignment E=3.8e-159

Best Hits

KEGG orthology group: K01194, alpha,alpha-trehalase [EC: 3.2.1.28] (inferred from 66% identity to ppl:POSPLDRAFT_126132)

Predicted SEED Role

"Trehalase (EC 3.2.1.28)" in subsystem Trehalose Uptake and Utilization (EC 3.2.1.28)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.28

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (663 amino acids)

>mRNA_212 K01194 TREH, treA, treF alpha,alpha-trehalase (Rhodosporidium toruloides IFO0880)
MADSVHSQIHAADKGPKVFSLGTVSSNGFNSVDIRGTYMLSNLLQELALARDHGQKQIVL
DEARLNENPVSRLTRMIRNSFWSNLTRRIDGDALEKICADPKNRGSNRAPRIYVPEAEPG
MRKYYERIAAAKPHLGLIVDTVPTNFDAKWVKDQNDKPGILALAMKEVSRGEGQDPDYQG
IPFVVPGARFNELYNWDSYFISLGLLADGHVELAKGIVEHFLFEIKHYRKILNGNRSYYL
MRSQPPFLTDLALQVFAQLDPETPEENKAWLKRAIQGAIEEYHIVWQEERRLDPVTGLSR
YRPDGLGIPPETEASHFTAVLQPYAEELGVSVNEYTEMYNSGEVKNEKLDEYFLHDRGVR
ESGHDTTYRFEKRCADLGTIDLCSLLYKIEIDIATSIREHFDDSLELDHEFTLTPFPFGT
EVPYKPTDPSLPDLSQPRSSTASKQTSAEWFARAARRKDLADHYLWHEGRGLYTDYDCKK
KKQSLYESVTTFWPMWAGMASEQQAEKIMRYSLIKFEVAGGLVSGTESSRGRISLQRPNR
QWDYPAAWSPHQIMAWVGCSKYGYAHEAQRLAYRWLHMITVGFVEAGGCIPEKLDAVAGN
ANIDAEYGNQGTDFHLIPREGFGWTNASYQVGLTFITQLQRRALGALTPPDVFFRAGRPF
HQQ