Protein Info for mRNA_227 in Rhodosporidium toruloides IFO0880

Name: 8595
Annotation: K03259 EIF4E translation initiation factor 4E

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 447 PF01652: IF4E" amino acids 77 to 273 (197 residues), 125.4 bits, see alignment E=9.5e-41

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (447 amino acids)

>mRNA_227 K03259 EIF4E translation initiation factor 4E (Rhodosporidium toruloides IFO0880)
MSARSSSLLSQTPSSRRPPFQSRGSSSLASQVSPASRDGAYATPQRKKGGPSLSLALSTN
TSPNGHSTTADGEQIHPLKYTWDVWFSQRQGNAKNGKKDEQGKNGTNGTQKEKESREDWE
GGVVKLGGFSSIESLHPFLAHLVPPSQLPGSLHTTHTLFSPSSSSPAPPVSHVICDYNVF
RSSIAPAWEDDHNVGGGRWVVRLRKGVADRVWEEVVYALVSERIGGEDERAGEKVNGVVL
SVRKDEDILSVWLAPSSRTERDVIRDSLRTALSPLLTSTSSSNLQLDYKPHPVVGSSDPT
PSSKRLTDLSLDSSSSSPAGTGRTHHLRRGDGERRSHSGISRRSEALGEGEAFGTPLSER
RSLGGLSRGGSGRGESPSNGGGFGSYVPRMRNGDERGSESSFERIERRVRESSPAGVIGG
GAFGRSSAGGRSREGSGRAEEDRWGRL