Protein Info for mRNA_235 in Rhodosporidium toruloides IFO0880

Name: 8603
Annotation: KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 474 transmembrane" amino acids 25 to 45 (21 residues), see Phobius details PF00890: FAD_binding_2" amino acids 31 to 63 (33 residues), 25 bits, see alignment (E = 3.4e-09) PF01494: FAD_binding_3" amino acids 31 to 386 (356 residues), 48.1 bits, see alignment E=3.6e-16 PF13450: NAD_binding_8" amino acids 33 to 60 (28 residues), 23 bits, see alignment (E = 2.7e-08)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (474 amino acids)

>mRNA_235 KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases (Rhodosporidium toruloides IFO0880)
MSAISQSRGAPDPSLTDEPRPLPGAPSGIMIIIVGAGIGGLACAIESRLEGHEVILFEQT
KEFKPLGDNIGLFPNSGRFIKRWGIHYELSKSCAYPDGLRWYRYDGQFITHQRQQKKGED
MGDANPFKDAPLYDTTRYDLHQLLIKRAKELGVQILMNTRVAKYVEEADFAGVEVDGKLY
KADVVLGADGVKSKARELVLGVYDAPRPSGYAIFRTSYSADRIRANPICAHLAALDEDAR
SIWIGPDAHFIIGTTKSGKEMHWLLTHLDKADVEESWMYPGKVEDALEYVKDWDPVVKAV
METTPEGALVDWKLVFRDPLPRWVSEGGRTCVLGDAAHPFLPTSQQGASQAVEDGVTIAH
ALSIAKKKGLPLNVALNVYQTLRYERVKRAQQLGVDNRNRMHKVDYSKPIDPEAVQLQFA
LWLWQHDAIQHCHDNFDSALVAPMVDQLASTSPPVAQADKLAIEQPVVAAVAAA