Protein Info for mRNA_250 in Rhodosporidium toruloides IFO0880

Name: 8618
Annotation: K19245 JLP1 sulfonate dioxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 379 PF02668: TauD" amino acids 97 to 370 (274 residues), 172.3 bits, see alignment E=9.8e-55

Best Hits

KEGG orthology group: None (inferred from 52% identity to ang:ANI_1_72034)

Predicted SEED Role

"Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)" in subsystem Alkanesulfonate assimilation or Taurine Utilization (EC 1.14.11.17)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.14.11.17

Use Curated BLAST to search for 1.14.11.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (379 amino acids)

>mRNA_250 K19245 JLP1 sulfonate dioxygenase (Rhodosporidium toruloides IFO0880)
MAPPASSATETLSHTLHTLSLRSEPAGKPAETKEQKDLRLRWWSETVKEGDAYPYERFLP
FFDTELRLPPLQPFKHVDPGHKALADPSPRSFLADAEVDDLTPDFGSEVSGVQLHQLDER
GRQQLALFVAQRGVVAFRDQDFADQDPTWMIEDWCKFFGRPHIHPCSGAPKGYPEFHLVY
RDAKAVFNYETDTRLTSSVWHSDVTYEEQPPGLTLLFLFDSPAAGGDTGYADQRGAYNHL
SPNFRAYLETLQAVHSGVEQAEYSRKGNRGGIVKREPVENVHPIVRVHPVTGEKALFVNR
QFTRRIVGLKQEESDAILNLLYLHIERGADFQVRLRHRPRTVIAWDNRITAHTAIVDFAK
GGARRHGARITAQAERPYI