Protein Info for mRNA_341 in Rhodosporidium toruloides IFO0880

Name: 8709
Annotation: K00860 cysC adenylylsulfate kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 208 TIGR00455: adenylyl-sulfate kinase" amino acids 17 to 201 (185 residues), 255.1 bits, see alignment E=1.7e-80 PF01583: APS_kinase" amino acids 33 to 189 (157 residues), 232.4 bits, see alignment E=2.4e-73 PF13671: AAA_33" amino acids 37 to 151 (115 residues), 27.7 bits, see alignment E=2.8e-10

Best Hits

Swiss-Prot: 61% identical to KAPS_SACPS: Adenylyl-sulfate kinase (MET14) from Saccharomyces pastorianus

KEGG orthology group: K00860, adenylylsulfate kinase [EC: 2.7.1.25] (inferred from 65% identity to yli:YALI0E00418g)

MetaCyc: 60% identical to Met14 (Saccharomyces cerevisiae)
Adenylyl-sulfate kinase. [EC: 2.7.1.25]

Predicted SEED Role

"Adenylylsulfate kinase (EC 2.7.1.25)" in subsystem Cysteine Biosynthesis or O-Methyl Phosphoramidate Capsule Modification in Campylobacter (EC 2.7.1.25)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.25

Use Curated BLAST to search for 2.7.1.25

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (208 amino acids)

>mRNA_341 K00860 cysC adenylylsulfate kinase (Rhodosporidium toruloides IFO0880)
MSAPHSTSEPVSKNIVWHEGVSQKQREELVGQRGVTIWFTGLSASGKSTLACALELELLQ
RGKRAFRLDGDNVRFGLNKDLGFSPKDREENIRRVGEVAKLVASSCTTTLTAFISPYLAD
RALARKIHEDSSIPFLEVFVDAPLEEVEKRDPKGLYAKARAGVIKEFTGISAPYEAPEKP
ELHIKTNETSIEEGVAHIVAYLEKNNFI