Protein Info for mRNA_368 in Rhodosporidium toruloides IFO0880

Name: 8736
Annotation: KOG2100 Dipeptidyl aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 817 PF00326: Peptidase_S9" amino acids 598 to 799 (202 residues), 148.4 bits, see alignment E=1e-47

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (817 amino acids)

>mRNA_368 KOG2100 Dipeptidyl aminopeptidase (Rhodosporidium toruloides IFO0880)
MTSLKLSPGSNITPKDILGLPRPDAGVANPSGSLALWPSTEFDFDKRRTERSIFLVDIEG
AKQAGASAKSSEDFSGPAEPKKVLHSLASTDAAWLDDRTIAFLRPAVPKDEFAVKGEHGE
RVDHPKDLSDDEFSKKAKEWSEKEGGKGTEVWAKDVDTEEEYCVGKFPVSIGDLTITHLS
NGDKSSKEEAILAFSATVFPDGDIFTVHDQEKKLEEKAAGSDALVYDELFVRHWDEWKPT
AGQKKQLHFVRLSRASDADQAGSNQSEASLEEFELVEPPKGRWSMQMQTSAASEETAARP
EVFSPLKGTPLECPVGPFGGASDFSFSAKHLLFHAKDPHLNPAWHTRTQVYLVPLSPRTA
ADAEPRAITVGTQGACSSPVLSPDGKRAAWLEMREDGYEADRNRVMIFEIESGKRWEASG
EWDRSPSKIVWAPKSDKLFLEAEDQAHVKVFELDVSSSTSLKEPVPLTTEHAVAHVSPLS
NSSLLLTWNSHSAPNQLSLLSVSKSDNSSAPPSTSLTPLASLTKNLHESKSLSRGEEFWF
AGDKGHPVHGWILFPPEVEKVRSAKQKGELLDPQLKDKKWPMAVLLHGGPQSAWTDSWST
RWNPNTWAGHGYITVLINRTGSTGFGQAFCDAIKHDWGGAPFRDIVAGVEFVKKTFGEID
PERTAGCGASYAGHNDQLGFKCLVNHDGAFSTSTIWAATEELYFPEREFGGTPWESPEIY
QKWDPSKHVQNWKTPMLVIHGSKDYRLTESESLAAFNVLQRQGIPSRLLVFPSENHFVLN
PSNAIKWNEEILRFIDEWTAPADGEEKSGYDVKYASQ