Protein Info for mRNA_377 in Rhodosporidium toruloides IFO0880

Name: 8745
Annotation: KOG1515 Arylacetamide deacetylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 471 PF10340: Say1_Mug180" amino acids 169 to 270 (102 residues), 26.9 bits, see alignment E=2.3e-10 PF07859: Abhydrolase_3" amino acids 179 to 377 (199 residues), 119.7 bits, see alignment E=1.7e-38

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (471 amino acids)

>mRNA_377 KOG1515 Arylacetamide deacetylase (Rhodosporidium toruloides IFO0880)
MSAPPPAADSATIASASPLAKARTVGSLVGTAVTTSAKHYTVGPQAPTWTLKTTLLTSVA
RKNAAIDVASRQKNPPRTTEDVLRLAREARSMMDKRLSIEADELKDGIVKTVHIDVRKRE
LGGLLADLSVCEDGERKIKVLTLPATSLQCSDTSTCLQAEWLAHTSLLDGTRPLRDLVIL
SFHGGGHVRGSPATHRDMHVRISEATGCLILSVDYRLSPEVVFPASLLDAVHAFFYLTED
LKIPSSQVIVEGDSAGGHLALQLLMYLREARLPWDENREADYLALDDRNDPFGSVRQYLI
ASDSALEQYYQQLLDEPYVSPSLAPLAALASLPPLLVQAGGLECFRDEITVLVRRLRLAG
NTQVTHQVWMDGVHVFQMFQAKRAGEAALKKLGDWVKTTAERDARLARVGHLAKSKDVKR
HKYSWVQSTQRLPDVKVKPEGAHVAGKLAAADANGVADELAETEVFRPVRM