Protein Info for mRNA_525 in Rhodosporidium toruloides IFO0880

Name: 8893
Annotation: K01265 map methionyl aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 443 PF00557: Peptidase_M24" amino acids 123 to 430 (308 residues), 148.4 bits, see alignment E=1.2e-47 TIGR00501: methionine aminopeptidase, type II" amino acids 123 to 439 (317 residues), 326.2 bits, see alignment E=1.1e-101

Best Hits

Swiss-Prot: 63% identical to MAP2_PUCGT: Methionine aminopeptidase 2 (PGTG_16374) from Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL)

KEGG orthology group: K01265, methionyl aminopeptidase [EC: 3.4.11.18] (inferred from 65% identity to scm:SCHCODRAFT_64644)

Predicted SEED Role

No annotation

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 3.4.11.18

Use Curated BLAST to search for 3.4.11.18

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (443 amino acids)

>mRNA_525 K01265 map methionyl aminopeptidase (Rhodosporidium toruloides IFO0880)
MRRRRRRAKTALRETLGLQTRRRASLRLPPLLAISSRPPKLTSLCRLAEKKKKKSKGKKK
TKAVQTEPPTVPVSRFFKSNAYPVGETHPYLNDNAYRTTSEEMRHKERLLLDEPSDSAFN
YNSIRRAAEVHRQVRKYARSNIKPGMTMTEIAEMIENGTRALVEENGMQAGIGFPTGLSR
NECAAHYTPNAGDTIVLQAEDVLKVDFGVHVNGRIVDSAFTLNWEPTYDRLLEAVKDATE
TGVREAGIDVRMGDIGRAIQEVMESYEVEVNGETKQVKSIRNLTGHSIAPYIIHGGKSVP
ICAPKGDDREENDEADQKMEEGEYFAIETFGSTGNGYVEHQGACSHYARIPEARAPLTSI
SSKKLLGVIEREFGTLPWCRRYLDRIGQKDYLRGLNDLVNKGIVQDYPPLVDMAKGGCQT
AQFEHTIILRPTCKEVVTRGDDY