Protein Info for mRNA_544 in Rhodosporidium toruloides IFO0880

Name: 8912
Annotation: K00902 E2.7.1.108 dolichol kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 986 transmembrane" amino acids 250 to 269 (20 residues), see Phobius details amino acids 283 to 302 (20 residues), see Phobius details amino acids 323 to 344 (22 residues), see Phobius details amino acids 408 to 429 (22 residues), see Phobius details amino acids 443 to 467 (25 residues), see Phobius details amino acids 548 to 575 (28 residues), see Phobius details amino acids 595 to 620 (26 residues), see Phobius details amino acids 645 to 660 (16 residues), see Phobius details amino acids 676 to 695 (20 residues), see Phobius details amino acids 801 to 829 (29 residues), see Phobius details amino acids 834 to 852 (19 residues), see Phobius details amino acids 863 to 880 (18 residues), see Phobius details amino acids 887 to 908 (22 residues), see Phobius details amino acids 920 to 943 (24 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (986 amino acids)

>mRNA_544 K00902 E2.7.1.108 dolichol kinase (Rhodosporidium toruloides IFO0880)
MNRTHSTLSSRSTPTATPRTSPHRPPAITLTAATARSGDGSPAPKHRLPRSPTTTTAPGD
QPVRPSLPGRDTGPESYYASGSQTDGVDGDYDSSTSASEGEDAVLRSRVFSEGLTVEDGT
ALARRALNGLGSLPAWAGERGRAEHVLVEKRSLSPSSLKSSGSGTSTHKERSWGSALLDT
LEGHPQHHRDRRKSASPAVGSVRTSRTSLRIRPSRPSPEQPSREPTPPLTLDSISAGWNP
FPLFHIRKSLIFEVIVLLIPFSFALYRLYTMAPTAIFPSIPKLPFRAILLFTLSIPFIAL
LRREGHYFKAPFTDERGYRDPRLADDGVAVALTLPILLASAVYWDTYANADDTAFGIGLP
GIRPLIDVWEANGIHATSSSRLPASFDLSVLSSPVEQARALFTARYELVLLTGLNAACLL
LHLGLARTVFQIERLPRSNTKRFFGFMGVAATISAGIWALCTVVDYYMKGGLPISPLEAA
TTTLIQQSSFYSVSRLARRGFTLGELNAMTAAGNALCLEFWRLTRARWLYKRGLPYIPLT
FRAPTPLVAFQAILIPGAYLAGFLLSPLLVISRHIASKPSHRLKWPTERERHRKLLALGV
LVGLAGIVCFVLGGWAGWMLGAEPSSFFRRLRRPWGWAAKYFWYGNSDGVDIVAVGTFNA
MPWWSPRRRTRGWRRIALVGYWGATISSAIGGWQTHLVRARRIRMKPPSPQPSFVGKSRD
SSGTATPTGEGSPAGTSARATAAAAAGKRLLGMGMDAMHGATRMGNSHEARDTQVKVGVE
NAREEKAVHASLNMRRKFFHALAVLMFVPGIAIDPAFTSLAFSVAFALFTFAEYARFFAL
YPIGAPLHIFFSEFVDSKDNGPVIISHFYLLTGCAGGVWLEGKGINRFTGVLVLGVGDSL
ASIVGKLVGRTRWPGTSKTVEGTVAFVASVVLCGWLLRLIGVVPSFSLPRYILAVTLAGL
LEASSTQNDNLIIPLYMWSVVSLLNV