Protein Info for mRNA_551 in Rhodosporidium toruloides IFO0880

Name: 8919
Annotation: KOG1515 Arylacetamide deacetylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 774 PF10340: Say1_Mug180" amino acids 231 to 346 (116 residues), 42.7 bits, see alignment E=3.7e-15 PF07859: Abhydrolase_3" amino acids 236 to 443 (208 residues), 159.2 bits, see alignment E=1.3e-50

Best Hits

Predicted SEED Role

"putative esterase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (774 amino acids)

>mRNA_551 KOG1515 Arylacetamide deacetylase (Rhodosporidium toruloides IFO0880)
MALWPFSWGSAAPDPSSSPKHSSPASLSTKHVSAPGGAVDPDADAGTEAQTALASWAALL
EPFKGGQLPEKARTDPSIRQKLVTTAPALWEYLPFLAKQGTSLTKAFVQHHLYGPPKPSW
GVELTLFTTFLREVSSYSHLSSLARLRSVLELGSLLPTPKDGIVTPISFRVKRRNLRGIL
ASYDAQETSQREISGEWVTNKRLWRKMTREWTLDQKGTGDEARAKDGANKDGYVCLYLHG
GAYYMFSAETHRYLTISVSRYCEARVFAINYRLAPETRFPGQLHDAVSAYMRLTLDLKIP
PENIIFAGDSAGGGLCLATLMYLRDEGYPLPAGAILMSPWVDLTMSCESWTTNRPYDYLP
NPNTEDDHLHPVKCLLGDSIEQYLTHPYVSPLFGDFTGLPPLLVQAGDAEVLRDEITLLA
HKAALAGVRVEHEIFEDCVHVFQAFLMLEASRRAFQSQRVFVKHTLPRLRRKAASASTST
TATTSTAPTPETEGAEKAGEEEGKDKTGEGFDFAEVDREVTADAHEVDQTGKAEKRSLPN
TPILGRGEAELPPQLQPDDEDEEDEDLDADVESELDRSSDASNTPPVLSPRLSAASPFFR
SDAGEDGGSPMKLDEEVDPLSPAPAAAAPPSAAMSKSSSASSSTGQRSVRPMLRAYASAR
DLSMSTLRHPPPAASSPTATTATRKHRSSTVAGPAPTQSPGSRSTPTSPRGSIVALSPLS
PKPVTERHRPLHARTTSHPEFQQLLKSYMEDDAAPRAKTRVWGAGHEGEDVEVE