Protein Info for mRNA_620 in Rhodosporidium toruloides IFO0880

Name: 8988
Annotation: K17742 SOU1 sorbose reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 269 PF00106: adh_short" amino acids 28 to 217 (190 residues), 152.7 bits, see alignment E=1.8e-48 PF08659: KR" amino acids 31 to 187 (157 residues), 57.5 bits, see alignment E=3.5e-19 PF01370: Epimerase" amino acids 31 to 201 (171 residues), 26 bits, see alignment E=1.2e-09 PF13561: adh_short_C2" amino acids 37 to 267 (231 residues), 201.6 bits, see alignment E=2.9e-63

Best Hits

Swiss-Prot: 49% identical to SOU2_CANAL: Sorbose reductase homolog SOU2 (SOU2) from Candida albicans (strain SC5314 / ATCC MYA-2876)

KEGG orthology group: None (inferred from 55% identity to uma:UM05252.1)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (269 amino acids)

>mRNA_620 K17742 SOU1 sorbose reductase (Rhodosporidium toruloides IFO0880)
MSHPSDGLPRPTPQLPESMLEMLSMKGKVSIVTGGSGGIGFAAAEGLAEMGGDIALAYRS
AEGMDKRAEDLAKKFGVKVKAYKCDVADYDEVTKLVNDVKSDFGRVDVFIANAGMGGSGR
IKDLSLEQWRKIQAVNYDSVFYAMKAVGPIFEAQGSGSFIATTSISAHIVNVPLDQSAYN
ASKAAVVHLCKSVARDWRLFARVNTISPGFFDTAMGAAPEVADTVYRYSVLGRQGDPKEL
KGAFLLLASGAGSYITGSDYLVDGGYTLS