Protein Info for mRNA_637 in Rhodosporidium toruloides IFO0880

Name: 9005
Annotation: K02516 PRMT5, HSL7 type II protein arginine methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 836 PF17285: PRMT5_TIM" amino acids 90 to 380 (291 residues), 243.1 bits, see alignment E=4.3e-76 PF05185: PRMT5" amino acids 388 to 549 (162 residues), 208.9 bits, see alignment E=7.9e-66 PF17286: PRMT5_C" amino acids 552 to 834 (283 residues), 187.5 bits, see alignment E=3e-59

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (836 amino acids)

>mRNA_637 K02516 PRMT5, HSL7 type II protein arginine methyltransferase (Rhodosporidium toruloides IFO0880)
MERLPIALHLTQDLLPLSGLGTTSFSSSARGQQPSKVVGSGAGYGPPLPAEGTPLMQLVS
NMLYVPPREPTPAEAAQGGYSAGTRGGKTEYDLVAVPLTNGNWQERWERMCTITASATEA
DLGALAGTVPTAQEERQRWEAEFWRSGGGFLRNEVNITRSEEAGSLVAFGSDWLELDSPV
EGIRFDAELALRQEIAYASYLSIATIILPPPKLENREFLADYARAINGALASSWHINISI
RLPVAEYTASELAARPGTPAFHAAVGDADRCETWEMWNTLRGMCNYSPRLTLTLDLSNPL
PSTRSLGRWSAEPLKHIFLPCSTFIPNAKAYPVLSKSMQAFLKGIFKFRPTVILSGTHRQ
LHSSGGHLAYAQYVRFLYRKSQELVPVEEYAQGYMDHLQQPLQPLMDNLEGETYEGFEKD
PIKYRQYEEAVYRALLDRPQGMVTTIFVVGAGRGPLVAGCLRAAERAQRRISLTAVEKNP
SAFVILQERSALEWGSQVKLVYSDMRSFNPREKADIIVSELLGSFGDNELSPECLDGVMR
TLKPDGISIPASYTSYLAPISTSRLHTEVTNPQVASAATVMDAKPAEQPYVVMFSQFHTL
SASGGRMGVEKVQECWTFDHPRPDIVTDEQGLPFTNHHNARSAHLSFHIPRAGVCHGFAG
YFEAVLYGDVMLSIHPERAAGDMLSWFPIFFPLADPIYLPASSELDVQIWRLTDNTKKRV
WFEWSAQAYLAITAPLSGPNGALGGLASPTSATFSTSSGVGGGRAGALSPVLGGSEAAFA
SAPSPMLGSNEGGRMSAILEEGQGLEHGAAGATVNRIKISQTRLHNPGGKTSWIGL