Protein Info for mRNA_671 in Rhodosporidium toruloides IFO0880

Name: 9039
Annotation: K03846 ALG9 alpha-1,2-mannosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 697 transmembrane" amino acids 69 to 73 (5 residues), see Phobius details amino acids 120 to 138 (19 residues), see Phobius details amino acids 144 to 167 (24 residues), see Phobius details amino acids 179 to 213 (35 residues), see Phobius details amino acids 227 to 252 (26 residues), see Phobius details amino acids 279 to 301 (23 residues), see Phobius details amino acids 334 to 362 (29 residues), see Phobius details amino acids 383 to 402 (20 residues), see Phobius details amino acids 414 to 434 (21 residues), see Phobius details amino acids 453 to 478 (26 residues), see Phobius details PF03901: Glyco_transf_22" amino acids 68 to 555 (488 residues), 260.4 bits, see alignment E=1.9e-81

Best Hits

Predicted SEED Role

"Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.259) / Dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (EC 2.4.1.261)" (EC 2.4.1.259, EC 2.4.1.261)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.1.259 or 2.4.1.261

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (697 amino acids)

>mRNA_671 K03846 ALG9 alpha-1,2-mannosyltransferase (Rhodosporidium toruloides IFO0880)
MATQVPSAGVNVPTAQQLRFRSKPQPAPGTKLQPGPNARALRPEEPGLLKDPNLRFAFGR
FNPTLTTAFRFLLLVRWASAMYTAIGDCDEVFNYWEPLHYLVNGKGFQTWEYSPAYAIRS
WFYLFIHSGPAVALRAFGFPDKRVAFFATRLMLATFSSFVEAIFYRACAVHLSSHVGRYV
LWIQMFSAAFYSAATTFLPSTFALYFVMLGTAASLSPVQAGWKRISFAVAAYGMAGIVGW
PFAVLLGVPLILEQLFVRGTVERVPSGQTALWASKRARSLGIALAFGATVAVPVVLVDSA
AYQKLAIVPLNIIKYNLFPAAGAGPELYGTEPWYYYILNGLLNFNILFPLAVLSLPFILV
TLSIDSKRFGDLRDRTSGQTHPAVSLAIRLVPLHLYLAVLMLQKHKEERFLFPAYGHVVL
NAAVAIYLVRGWVEAAFLKVTASPYRATRTGLFSHFTRAVIVFSCLLSFARISALHHYYH
APFNVFHHLQTYDLSCLALVTHPELAPSIDPTIPHTEFAKALDASKALPLDVLAPLNLRL
CIGKEWHRFPSSWLVPDEVETRFIKSEFDGILPKVWEEPGEGKGLFGRATAVEPQGMNMF
NREEKDRYVPVSSCDYLVDLDFPARPASSFSPLEPRYAADEAHWDKVYCHPFLDAANSPR
LNRAIKLPLPGWDAKNSWGEYCLLRRKGLFEDSKSKA