Protein Info for mRNA_686 in Rhodosporidium toruloides IFO0880

Name: 9054
Annotation: K06867 K06867 uncharacterized protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 166 PF12796: Ank_2" amino acids 8 to 108 (101 residues), 47.5 bits, see alignment E=5.5e-16 PF00023: Ank" amino acids 39 to 70 (32 residues), 22.1 bits, see alignment 3.9e-08 amino acids 76 to 108 (33 residues), 23.8 bits, see alignment 1.2e-08 PF13606: Ank_3" amino acids 39 to 67 (29 residues), 20.6 bits, see alignment 1.1e-07 PF13637: Ank_4" amino acids 40 to 86 (47 residues), 27.6 bits, see alignment E=8.5e-10

Best Hits

KEGG orthology group: None (inferred from 40% identity to mgl:MGL_1378)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (166 amino acids)

>mRNA_686 K06867 K06867 uncharacterized protein (Rhodosporidium toruloides IFO0880)
MASPNERLIYAAKTDSAEMLQAVLSGSEEFDVNFQDGLGNTALHYAASAPSPDALSILLE
TEGTDVDLQNRLDRATPLHLAVKLENEDARQGVIEMLLDAGADPSMRDRHGLRVQDYLRP
TSSDVDKEIAQMLRVAMAEKTMGGVANNADLADDDDGEPGSGSESD