Protein Info for mRNA_696 in Rhodosporidium toruloides IFO0880

Name: 9064
Annotation: K03754 EIF2B2 translation initiation factor eIF-2B subunit beta

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 453 transmembrane" amino acids 336 to 351 (16 residues), see Phobius details PF01008: IF-2B" amino acids 31 to 438 (408 residues), 185.4 bits, see alignment E=7e-59

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (453 amino acids)

>mRNA_696 K03754 EIF2B2 translation initiation factor eIF-2B subunit beta (Rhodosporidium toruloides IFO0880)
MALLTESVSKPNVHKRIDALAVRLRRRQLIGSREVALEVVRLFRDVVAGARFSPFDQLLA
HLEEIGRVLQDAGPKELVVTNMTRRICMLIREEYQTALSNHLAETGGPSGAQTPMQVPQT
PSLNRELSGTFMTEQDLPIKSSGALGSIFDLLGHKSAVDGVGRASYGFASTDNSPTASTS
STPIQSPSSSQILQRPSPATLNSNFASYMSDGDQSREEVFSRRSYHLKPVFIEAIQELMD
EVETTYRSVGEQALDHIHPGEFILTLGHSKTVEAFLKNAARKRKFTVICAETAPSFSGRD
AAVALSAAGIPTILIPDSNIFALLPRCSKVLLGPHVILADGALLSITGSLPLCLAANRMR
VPVVAVGGMFKFSPVYLGEADWGMRDLGSPEEVLKSTEECVAERDGDELDETEVLNPYYD
VVPAEIVDLYISNLGGHPSSLLYRLLNDMYGSS