Protein Info for mRNA_703 in Rhodosporidium toruloides IFO0880

Name: 9071
Annotation: K20223 IPO7, RANBP7 importin-7

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1078 PF03810: IBN_N" amino acids 24 to 114 (91 residues), 40.8 bits, see alignment E=3.3e-14 PF08506: Cse1" amino acids 377 to 557 (181 residues), 25.2 bits, see alignment E=1.4e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1078 amino acids)

>mRNA_703 K20223 IPO7, RANBP7 importin-7 (Rhodosporidium toruloides IFO0880)
MDAQRLYQVFTASFEPDPNVRIAAELELKKLEPVEGLLPTLLQLVSPSSSSSPVVRLAAA
IYFKNRIRSSWRSPLEPSPFASPAAVAAAQKASTFVAIPASDRQSVKSSLIPLYAALAAD
PSSSKVKEQIGEALSKVIECDFPTEWPGLVDEVKTMLAGNEGQVEAGLRAAMEVFNCLRY
AHKDETGETLPQLTTHLLPLLLPIGQKVIASSPSEAAAFTTQGTLLRLVLKSYKNSIIHT
LTPAHQAHDSLIPWGTLLLSVVAHPINASLLPEDEDAREKHPWAKSKKWACWSLNKLFTR
YGSPTQLPKNMVEQYGQFANRFVEQFAPEIMKTYLAAVEKMVAQNEWFPRKGKFHILCFF
EECINPKSTFALLKPHIPSLIEHFIFPLVCLSEEEIELFSDDPTEFSRQFFGDFIADSYA
SPTASALAFLAALTETRAKTTLLPLLQFIQSVVDKYPAETTPRQKDGALRMLAALAPTAV
KSKKLAPLLESFFLRHVVPEFKSPHGLLRYRACDVVEKFESVDMTWAAQDALENTLNLLM
NCITDTDLPVRIQAAIALPELVRYERIREKMLPNLGRILQELLKLSSEVDLDSLTNTTRS
MVSEFSDEVVPFAVELSHSLVESYRRLLQETLETRDKNPSGVDTYDDEKTMVMMNVLKTI
EQLISSAREKKELVAEIEKAVVPLIEATIRHSVVELYDEAYEILDSLTFFQQAISPPMWA
CFEATCGALKKDAGDYLHETFGFIDNCINYGVDILSTNTEYRRAVIELFDTCMTSRALGA
EDRVIACKLAEALLLRLRGQVDEALPPVIERCMWFVLKDDEDEDFVVTKTLFMHALELVI
LAISYNPQLTIAILDRHDWTQQFFAQWFKNLSKYSRVHDKKIILWAICALFDWLNGPGAS
SPLTGNVGQLVAGALEVFKTYPSALAERKVAEAARDLEEEEVDDDMSDDEDLDLGEDDGD
FDDADVRDRTTDYLDQLAQSEANRLARGGAFDDGDSAWSDEILWASPLDQFDSYQRFSGL
LANLQTANPSLYQSSLSALDASQQGVLADIASKASEGGDAVVAAKAYAELQAEEGGAA