Protein Info for mRNA_726 in Rhodosporidium toruloides IFO0880

Name: 9094
Annotation: HMMPfam-Ferritin-like domain-PF13668

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 331 PF13668: Ferritin_2" amino acids 25 to 156 (132 residues), 57.7 bits, see alignment E=8e-20

Best Hits

KEGG orthology group: None (inferred from 57% identity to uma:UM00395.1)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (331 amino acids)

>mRNA_726 HMMPfam-Ferritin-like domain-PF13668 (Rhodosporidium toruloides IFO0880)
MAWPGQPAGGLLIYKPTYQVESNFDFQSLNLALNQELIELDLFHNMLARFSTQDFEAAGL
TADDRFLIEHMADQEIGHAIAITNMLGVDRAAKQCVYQYPFNTVKEAILFSQLLTRWGEA
GVYGFLGQLDSRPAAQILLQSITTEARQQMIFRQFQGLPAMPEWFETGLPQSYAWTLLSP
YIQSCPPNNPRIEFTRFPLINITNQPYALDGTPGINSNYTLTEGAGRTLQFTWEPLNKTV
GYDGLYKTQSMAGEPKFMAFIDQLNVTYAPLQNISNNSASAVVPNGTVFPPQPQAVNSLF
VALTDSNPYLSVYNLSLINNHTVAVGLYQAS