Protein Info for mRNA_739 in Rhodosporidium toruloides IFO0880

Name: 9107
Annotation: K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1393 PF00069: Pkinase" amino acids 410 to 556 (147 residues), 104.5 bits, see alignment E=6.6e-34 amino acids 649 to 748 (100 residues), 47.1 bits, see alignment 2.2e-16 PF07714: Pkinase_Tyr" amino acids 411 to 518 (108 residues), 68.8 bits, see alignment 4.9e-23

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1393 amino acids)

>mRNA_739 K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase (Rhodosporidium toruloides IFO0880)
MAALPIRPPIDRTSTTPVASNPHRTHQASSSPSSSHTLPPAPHKRIPSSLSRSSRIDSLA
AVANRGPGAAGTGEVSPRMLTSSRSHSSLASAHAAAMAPQGRGSKGKGKAKGYGGGGNES
YVVESSHSSTRSSTSTTTSATTTTRPAQTRSTVTRDQDGFVVTSRPKYWQPPPNSPGPPA
IMAANPFYRSSPSSSRANSRANSTNTSANNSASSSRANSRERERRQQRELADKARAALLA
AGAVSPPLGTRRGSSPAALTGVDPANAPKTTLHLSSSIDSKGRRMVNQYVRLKTIGQGSH
GKVWLCAEPSVPEEGEDDEVDVDEGEEKEELADETERAEATCTGRRRRKRTPSERWEADI
DAGRVKYCAIKSVAREGPGGPKGSRSLRLAAQSKTSKKASTQGSGGIGADDKVKREVAIM
KRLDHPNIVRLKEVIDDAKSKKVFMVLEFMAGGQIVWQDDNKQPTMTVDEARRTFRDVVL
GLEYLHYQGIIHRDIKPANLLWTEDHSTVKISDFGVSHVSEALLRCSPDDDPVCEGDDEK
ALRKTAGSPAFFAPELCFPVEWHAGGAASIRGMGLYATRDSRMMMATNATSRSMDTYFPR
GIDGAHLTPAPSGATYSPPTSPNGIPLSSVTISAPLPPPSPSHARTRPPVGKGIDIWALG
VTLYCLLFGDTPFNARTEYELYNVIVKEGIRVPERMGREGQWTGVGKGWDGAGDGVEGRE
TVDLLGRLLEKDPTKRITLEEVKKHPWVLRNLSNPESWLRATDTAKIHHVTITDEDVQHA
TQERGRVASIPPIRNRPGIRRALNAALAKFPAFARIKSTRTSASTNSDEMVKSAGGRRSR
SKSNSSGGHGFGGAWTAEPSPALASTSVPSTTVSRQPSDGGGAPLKSGKSKHSYEHGVDL
RRIISGSGAHESSSSGVPRSPSPVHGHRGGWAARRKVTPSDSPSGPSGPTSPNPLLTSGF
PELSRSVSTSSIMGSGTTSGSRSAFSNHFFSRKPSDSDTTGAKSANSSIPSPAARSSGFS
PSPWAGSDTESSANGKSGRSISRMLGRLSGGDKSSGATSTTGSIRSRSDAREREPSRQLS
GSTEDSFDAGIAPGLVERLEAAGTTRDKYDALGRLVVGRKGSAGSTSTHSRRRASVASGR
SAARAELDATDGEIDLTEFEYSDSDDYDDDDDDLDDFMRPPIAHADHFSGWKQDFGDFKF
GVRSPSDDANIGRSAVEDYALSPAGTPPTDGLDALEEEDGKIGTESTPSAAAASRPHVSP
LRDFHVPYADAVSFQLCPLDIEEYMATPRGSVPASTPSGVVASSATSPTPLVIPPAMQPV
DCPPRVDTGRAHSPRDGSIRGVSLDPPSPRKAHQPALGQWDDEDCDGEEEEILVVPRRRR
AATLSGNPPTSPR