Protein Info for mRNA_758 in Rhodosporidium toruloides IFO0880
Name: 9126
Annotation: K20404 DEPDC5 DEP domain-containing protein 5
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (1819 amino acids)
>mRNA_758 K20404 DEPDC5 DEP domain-containing protein 5 (Rhodosporidium toruloides IFO0880) MPVELHIDTQAANDLTIHPAALPVDARAGDLVAVRPVLSPHSKGKARDRPLLYKVEKNAG DADELAGANGGAGGTADQQVGVAGTAAAAATTTRRGKAHVVVSATLAQSFSWVKNRIEVE LSLIPAPPPRRVCASHVELYFNNMYLSRPDSFSLTLALANKVLHTGQRVALPGSGARLRV GDMWSAGPGPQPSSKGRRGASSSSSAENARIDAAYVTEETKFVFRSEGGRAYIFVEVSEE LWQFEEDGSMLLEKCDLFLQELFSHYSGKMSLEAEDKRSKGIPTTHIVSIILYGRVIYDD EQDGEEERAPLCRLEDGTLYRDFYKVILDLTPSPPQSVIHKVALELRRWQSTVLLRRRSD GTERLSGRLACAHASPILEATNLALNSFEEHWIDRDLQRTGQEVIVLTAGTSFYQVEKSL LRLTTERMLAHGIGLDLISLSKMPLHTVPLFQFRSPDPAASEVSLAAAAAAANEFAIALP ATTSHAGGSARPADSLSHVFSASYTGSSPARSPALPTHRFPASNATSAFRPSSLRQAHGF HSASIPSTSTAPPLRDPHAPEEQASTAATRVVPLLRQVPDDQRDPLYFDPPPPPAAARAT HHARLASASIGLQPSSTTSSAIPPPSQPSSSASMPPPPLPATPSSALPPASPTAPQPTTH LETSLCYAAPMFVFPHFFGTQIDKPFRIDRFMPRARCYELSVQGVTERVPIAIPLLHLDS LGGKKVDSDSDGGEGFLTEMEQRLQRRERYDALALGARDPFEPLGGGACVGGVGKGGRGG DGATRWAEVRESGATTGTSGTSEGGGKSGSGWSSDGHNVGSLSSSSEAEAADASLRPASV VARHIDAEEHSDENSGASTPVLSPKNSLGLGLPSIAVADSLRKSSNLPDDGTTSSRRGSV STTSSAAAHLSVDEDARGRRSIRDTAGGRKKSVVEASLGRSKTPVPKHRRDRSASIAASI RTVASGQSKADIGSPALSSTRKASTPALIARLTGGVGATTTSSVPGSTSAPSINGAHPRP GWLSLFGRSHTLSNAPASPAAQVAVARVDVQASLRNEDSPRLTSEATLVDTPVLEVSSSS RRNSSRSRTDASSIMSEEKSSRTQPISIGSRLGETTSGTGDTSGHARKKSAAGGGDSAAS SSVKEGGRMSSSLKAYDSAGAMRRAFGVSGGKISVAEKFNPSKPGKRSVGLADQARRWAG IVVMERRSMRLGVKWRSITRGACLPITTDYLPSADALQTQYSEFRYTVPTAAVTSSFLLR ADHPKRSHSLTLVTELICQRLSQGFQICLPSNAEFATSKTLHDVLGDIQEGEVTAVYLSL ANQIHRIWYDRRSQSVFVRILRRRRTWAKQPYEYKALIWTVGRENYDMSRIAFPYPAMID PVDWQHVDRLVAGVEKPDNQQAVRYRRTRLVLLPAAKVPDRDYIIGITKALQGGEVSDAA IRMQGFYALMETIESARWTPAGVEKMPLSIAHTTLDAPGWAIAEARRLEQATPNPASPLS PTSASLPSQPPQPRQNWLSRMQGRTGAGRGDEPGTPQSERDVELSSPALSMASKEIVSAL NKVDPTASVSDLPSSVPNADKSAAKRPVIVMSHAVVLDLDPQKRSDRAERVLCHLDRSHN IHAAYHIELAWLTASGKIVDTTIQTWARQMARYGLNLVEVSMRPVSLSHNPFQKPAMLRP VVLPVSPWSSDEESSSSDDEAEASRFKRPPRQKRDALASILRHLDFVLDLGADSTFPPSI EVQYSYRRTATLHSQYIHRSGTILVSIMEDEEGPLFAYAPNRIFTTHNPILDRDEPVKRL KEVCADAELLRRLYGETDE