Protein Info for mRNA_760 in Rhodosporidium toruloides IFO0880

Name: 9128
Annotation: Interpro UDP-glucose-Glycoprotein Glucosyltransferase UDP-glucose-Glycoprotein Glucosyltransferase UDP-glucose-Glycoprotein Glucosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 852 signal peptide" amino acids 1 to 41 (41 residues), see Phobius details PF18400: Thioredoxin_12" amino acids 140 to 288 (149 residues), 52.1 bits, see alignment E=1.2e-17 PF18401: Thioredoxin_13" amino acids 317 to 423 (107 residues), 37.9 bits, see alignment E=2.5e-13 PF18403: Thioredoxin_15" amino acids 449 to 684 (236 residues), 112 bits, see alignment E=6.1e-36

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (852 amino acids)

>mRNA_760 Interpro UDP-glucose-Glycoprotein Glucosyltransferase UDP-glucose-Glycoprotein Glucosyltransferase UDP-glucose-Glycoprotein Glucosyltransferase (Rhodosporidium toruloides IFO0880)
MRFRFRSFTAPRLSAPTMLAFRLYSALAALLFASAAWAQAQSSVSISVASSPSIDIATRF
LETLHLRKPTVFHSFLHMLTEFKIRPKIDFTCPAFAPRAPGLDGKPRPGRYANHNPIFTR
LATQNESFVALEHTLLRSRELRERGGYTLFKLALAGGVANVEIREMYRVWEEREKEVEQP
AKVRGECVSWIDVAGKKVCSFDEFWKVVGLKENGRWGVIPVDGDSPKTYSFDRFFPHDIQ
NSSLPLVVLYAAPTDEALPELYNALHALAAPASGRPPRLQFAIRWRPDPKLKLQSYEPDW
RVEAAIKDGYEVPQVQSDFSARAVSYIRAAKDKFAALTQVATALPTVASDILATTARKGL
PTTSSVPEQLLINGVPVPLDNLTYSGLLDVLDSERQLIYDVAASTVGLYNEDAAKIIRNA
ALTIEGPRSSAASLAVPTKERPLKFVNLASAMSKLATAFAKNSYIEGVIENETEETDPPA
KATVHVVTDLNSEKGRQLVRNALKFAENTAEVRVSFVHNPGPDAEEPHAYLLSTLVAAMV
ESEDFPEAFPSEIVTFLDFDASPANPPKRSLDDIWTKENPMTPFVDQGATEAQQTVAKAY
WKAARTFCERAGFEPGASAVLMNGRVVELPEHECAVGSFSALHQYELLRRIKPVVEAATA
VFPDKIRENRKTQAEVFAAASSILGVHGVSRQTIGADKLKGLTQLVHGEPSHALFLFTAV
FDPLSPFGRTVAPILETVRTMPLFAVKAYLLPSASSTKPDFTTLSGRPFPVETLFDDNDT
ETVPRVTFAGLPEGAVLDVKVFDGKTGEALAGPGGQGGETVVVEKDAKEVVFGQVVEVKS
EEDVKAHVRDEL