Protein Info for mRNA_862 in Rhodosporidium toruloides IFO0880

Name: 9230
Annotation: KOG2867 Phosphotyrosyl phosphatase activator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 417 PF03095: PTPA" amino acids 20 to 252 (233 residues), 138.9 bits, see alignment E=1.3e-44 amino acids 266 to 294 (29 residues), 23.6 bits, see alignment (E = 1.7e-09)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (417 amino acids)

>mRNA_862 KOG2867 Phosphotyrosyl phosphatase activator (Rhodosporidium toruloides IFO0880)
MTTLGELLVPPTPPAHSLRPTRKIYAEEDMPQWLDSEAYANVEVFIARLRAASAHEAPHE
QSQNAGLVLDLLRQLSASLTAEQNGSGVEQESKLGFQRWLDRAEEMANLVHADLVDSSLS
SALPELRSQFRSSFGSPERLDYGTGHELSFLAYLLILRLSGVLTAADEPAIAKLVFPAYF
DLMKQVVKAFRLREAAKMGIWGVENGHLVYEWGASQKRIHPSKRPVSLLSTPSLSPQHIS
YLFLTTLLHINAGSTSPATSSGDEPDGLLRLYRAEVLHRLPVIQHLRFGPFFRWTRAGTA
EVLPSSGDGLDEEEKKQLDEMLNQRVTSEGTVAPWALPSLSGEKTPTEILERLPSPARTP
PRSASPEEQRRDSPPSPSSRTSPLPRPYSESPGGAALGRRRMSRLSISESLDEDERD