Protein Info for mRNA_868 in Rhodosporidium toruloides IFO0880

Name: 9236
Annotation: K14782 AATF, BFR2 protein AATF/BFR2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 519 PF13339: AATF-Che1" amino acids 178 to 308 (131 residues), 101.4 bits, see alignment E=7.2e-33 PF08164: TRAUB" amino acids 395 to 477 (83 residues), 103.8 bits, see alignment E=5.9e-34

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (519 amino acids)

>mRNA_868 K14782 AATF, BFR2 protein AATF/BFR2 (Rhodosporidium toruloides IFO0880)
MAKRLTLAEQLAQISQPAPQDYDPEEAYATYADNRTSADAADAARAEYVDVGVSKLRKKG
EAVLDPKYEGKKGSRAALYADTDDEDEGEEEEYGMNGFGEEDDEDEDEMGDFEDLEANGA
DEDDGSVDSDGVDGAEDDEDDDEEDEAPARPARKVESRTKQQDERSMVSQLKQAASADVE
KGRDVKKQLAFCDSLLESRIKLQKAVGAANLLPQPARAKQYFDSLGDEVGDVLDEVKDLS
EELFQLRQTLLATNEKIELPSDFGASRKRKRTSEFDADFLDLTLADLKTLEETFHPFLRS
TVTKWSDKVLAASGLALKGGDKKFKAVNQNAMAQIDHAMSGAGERERLIRRTRIRRGEGK
VVGAPEGKAEEKELEGEKKAEKEVDVECFDDSDFYQQLLRDVVESRMLDLDDATMNQLRQ
ATALARGKKVKKVVDTRASKGRKIRYHVHEKIQNFMIPIEAASWHDEQIDELFAGLLGRS
FPQTGNGEQAPETALDPALDDVPNQQPGEIEVGNLRLFG