Protein Info for mRNA_899 in Rhodosporidium toruloides IFO0880

Name: 9267
Annotation: K00486 KMO kynurenine 3-monooxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 540 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details transmembrane" amino acids 513 to 530 (18 residues), see Phobius details PF01494: FAD_binding_3" amino acids 7 to 200 (194 residues), 40.4 bits, see alignment E=3.4e-14 amino acids 331 to 366 (36 residues), 33.7 bits, see alignment 3.7e-12 PF13450: NAD_binding_8" amino acids 10 to 40 (31 residues), 22.2 bits, see alignment (E = 2.1e-08)

Best Hits

Predicted SEED Role

"Kynurenine 3-monooxygenase (EC 1.14.13.9)" in subsystem NAD and NADP cofactor biosynthesis global (EC 1.14.13.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.14.13.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (540 amino acids)

>mRNA_899 K00486 KMO kynurenine 3-monooxygenase (Rhodosporidium toruloides IFO0880)
MSSDERTALVVGAGLVGTLTAAMLASRGWTVTLLESRSDPREGTHAERARSINLALSPRG
IEALRSVSEELAGRVVSEGIEMRGRMVHKNKVVRAKGKGREVRVEKEGQDYGRYEEEGEC
IRSISRTALGIHLLDHVDGLPSEGRGSVTTRFETKLVEMDLRKEDGVDVVLQKKGEQPEK
KHFHFVVGGDGAYSKVRQQMMRGSKLRFDYRQFYAPHSYLELSIPPGPNDTFLLEPDYLH
IWPRGEFMLIALANQDKSFTLTLFAHDSTFTSLDANLASLAPGAPNPVVELFRREFPDAL
EQMSEEALLQSWRENPKDGLITVECSPYHYKDKVLLIGDAAHAMVPFYGQGMNCGFEDVR
VLSSILDHFGASPSPLVPSPLPYSLETASLASFSKLPTEDNETPLARALSIYTHLRAPSL
AAIQTLAHQNYTEMASSVLSPLYLLRRSLDSILTSVSNVPLFAIKRDPDPLKDQGGRWES
LYRMVTFRPGLAYEEVIRRRDWQGKVLDWAAKVVGRVVVAGAVAGVGLRYAGKYRLVRVD