Protein Info for mRNA_902 in Rhodosporidium toruloides IFO0880

Name: 9270
Annotation: KOG2398 Predicted proline-serine-threonine phosphatase-interacting protein (PSTPIP)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1002 PF00611: FCH" amino acids 64 to 135 (72 residues), 37.9 bits, see alignment 3.5e-13 PF07653: SH3_2" amino acids 945 to 988 (44 residues), 30.8 bits, see alignment (E = 3.9e-11) PF14604: SH3_9" amino acids 948 to 999 (52 residues), 42 bits, see alignment 1.4e-14 PF00018: SH3_1" amino acids 948 to 988 (41 residues), 35.7 bits, see alignment (E = 1.1e-12)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1002 amino acids)

>mRNA_902 KOG2398 Predicted proline-serine-threonine phosphatase-interacting protein (PSTPIP) (Rhodosporidium toruloides IFO0880)
MQRPSSRARTRSTSSLEGAYHPPTDTAPDAFDYCNAFWVDPQKSREGGRRAEGDAEEKDW
GKEGYETVMGRVKASAKVCDDLRALLKERASAAEDYAKRLNKLSRHSFGVGETGHMERAM
LQVKLELEASAKSHTDLATLMRRQEATVADFVQKREAARKSQQTNVEKLWKNLLNTRQHV
LKAKAKYQDDAIQINALHAQASLLQGRDLDKATLKLDKAQQTVVVNERDYRNYVNVLKET
TVNWNMAWKSFCDLVQDQEEERLEFLKSRMWDYANGLSTLAMAEDESAERTRTALEQCDP
KIDIRIFVQQFGTGNAIPDPIPFVDVSAKTAPPKQSYRSAAFTRSSTRIPGVTHSPSAID
DIARAMHHPPPSQQQRQQPQASSQMPRSSTQPDLESQSRPPSRAANRMSQPNLSTQQAPA
PATPQHLASPARPGQPMQDVGATPSRFAVSPSANLRQRPSSEHVPVASPPTSKPGHIPAS
AFQGRQSAVSPSLGASVNGASPATVDAGSSSAPARYEASAPAPKKAAGATPAEDDENDPL
LQALKQLQTTPVQAPARSQRSSSDLRGSAASPSQRPPSRGHLNQPSFGSAAGLPNGMMQP
PPAQSQYHRPRSPSIPYVQSNPPRPSSRAGSNVSSAAGANPNRQSTGPHLTSPAPVGQFG
ARPASPAQGQRYSARPTSPQPHIPDSLRPRSPAMGNPPSVASPAASVQSPARPLSAFGTP
LSQGGYASPQQAPPPQQQFGAPPPQQPATYAQLPPQGAYGGYRATSPAPRPPSVVSPATG
YASHPQQQPHMAQAPSQQFQQYAQAPPPQQAYAPPPQQVASPPNSYAYPAQQQYAPPPQQ
QQQPLQHQQQYGRPPSVVGGYASPAPNAQQAALARTPSTHSGVSGVSIQQTPLQAYQQPP
VQQQQPQPQQQHARGTSVASMRAGQTPPPPPTGQYTESGQPILFYVNALFDYQAASAEEF
SFSTGDVIAVTGTDPDGWWSGNRVGDQGPSKLFPSNFTELLP