Protein Info for mRNA_926 in Rhodosporidium toruloides IFO0880

Name: 9294
Annotation: K20647 ARHGAP32 Rho GTPase-activating protein 32

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 927 PF00611: FCH" amino acids 370 to 443 (74 residues), 51.9 bits, see alignment E=7.8e-18 PF00620: RhoGAP" amino acids 730 to 879 (150 residues), 158.1 bits, see alignment E=1.6e-50

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (927 amino acids)

>mRNA_926 K20647 ARHGAP32 Rho GTPase-activating protein 32 (Rhodosporidium toruloides IFO0880)
MSNPFPDPPSRTSFSSGRSRSSSNLPADARRPSGSSQSGANAQDPYSPTSSRNQSFSSTN
GALPGASGSGLVFPGPAQGSRGGMASRQANDHIGEDDEEQESLSPSQIAYQQYFPGPPPS
STPLPQREIDPAQYPLPTSRQQSIDSNAGGTSFDIPTFSMPFPPPPHHPSSSSYSLNREP
PTLSSLSRSHLAAPGLHKTPSSSSLSRSPSNNSAGGVTGSSYSYDPNGTSPSMPQRSLTG
TVEPSPNPSQSSSNAPSGSVSYDPFGPVRAVSPTSSTSRLPENDFERRGEGLGLGRGIMG
DQAGAQPERPSTGMDTRRPSLATVAGAGGYSDFGHGSVAPTQEQQEDLVPTGFDEGVLRA
LCDMDCGTPLLLERMKQSMASCREASIFLKKRAQIEEEYARQMAKLAKSSIESYSVGDGK
AGSYVNSWISILRTHELLGDNRLKFASQLNEMSDELATLGKEVEKSRKATKELGARLEKG
LQEQESLVDKARIRFNSAAEELERLLVLKQGEMVTPSSVPHSGSSAADKSKGRSFGKAMS
KLKGPKNAAQIAKQEEEVRSRMGQSSDAYRAQVAGAQSVRQEYFNLQLPRILRSLKESVD
ELDLGTQYHLSRYAYLFESLLVTDGLTVSPISIEDGPGIKAVIDAVDVREDFKTFMQQFA
LNWQVSGQRGPRREGPAEEGFPARPSLSPQPSSNNVGSQSFSSVPPAAVSQPTFGVDLGE
QMARDNVEVPRILEKCAEAIELHGLDSMGIYRLSGTTSRVQRLKAALDRDLDGTDLLSEE
NLSDINDIAAVLKLWFRELPEPLLTWELYHQFIDAAKIENDRLRHIRLHERVNDLPDPNY
ATLKFLMGHLDKVAALEHLNQMSVSNLSIVFGPNLLGAPPAHLAGMYPPAPGAEGANGAT
GGGLQDMQWQCKCIETILSHYQEIFVE