Protein Info for mRNA_980 in Rhodosporidium toruloides IFO0880

Name: 9348
Annotation: K03946 NDUFA2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF05047: L51_S25_CI-B8
  • amino acids 29 to 79 (51 residues), 48.7 bits, E=3e-17

Best Hits

Swiss-Prot: 46% identical to NDUA2_BOVIN: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (NDUFA2) from Bos taurus

KEGG orthology group: K03946, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 2 [EC: 1.6.5.3 1.6.99.3] (inferred from 55% identity to uma:UM01562.1)

MetaCyc: 43% identical to NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (Homo sapiens)

Predicted SEED Role

No annotation

KEGG Metabolic Maps

• Oxidative phosphorylation

Isozymes

Compare fitness of predicted isozymes for: 1.6.5.3, 1.6.99.3

Use Curated BLAST to search for 1.6.5.3 or 1.6.99.3

Protein Sequence (92 amino acids)

>mRNA_980 K03946 NDUFA2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 (Rhodosporidium toruloides IFO0880)
MSALRKALPAAVRELRLFGCQQSPGSEGVRAFIRSSYPQIKSANPDLPILIREASGTPAR
GFVRFERGVEKQISLEGASSAEEVEKKIASLL