Protein Info for mRNA_1070 in Rhodosporidium toruloides IFO0880

Name: 9438
Annotation: K20792 NAA15_16 N-alpha-acetyltransferase 15/16, NatA auxiliary subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 948 transmembrane" amino acids 180 to 197 (18 residues), see Phobius details PF12569: NARP1" amino acids 217 to 782 (566 residues), 484.3 bits, see alignment E=1.7e-148

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (948 amino acids)

>mRNA_1070 K20792 NAA15_16 N-alpha-acetyltransferase 15/16, NatA auxiliary subunit (Rhodosporidium toruloides IFO0880)
MPPRRKPTKPAPSSTAPPPPPPATYETGVQDKSHNRYLDQPNAQRFRDVLTRYEAKEYQK
GLEEVQLILEQYPEHGESLCMKGMFLCCLDRKDEGYELVKRGVKNDMGSHIVWHVYALCL
RADKNFEEALKCYKKACEIEKDSLNLLNDLSTLTVHLRHYTDYVGVRLRILRSQPRLRRN
WIALAVAQFLAAQYPAACQTLAYYESMLREVPEGDVEFGEVLLFHAKVLEEAGEYERCIE
FLSEKSGQIVDRTAYSVQRARLLLKLGRTESALWAWEVLLEENPESTEYIKATVQAQGGD
CDATDSAAREHAVTLLDALSTKYPRSLSIPRLALTLCPSSHSSFRTRTSQYLLTALSKGV
PSLFADVKALYTSDEEGREKARIVGEVVEGFRRSLEEKGAVVTDEIGDDDTADSPSTYLW
TLYFLASHYSQLSQPSLALSTLSLALSHTPSLPELHTLRARILKRAGDAVGAAQAMEDAR
KLDGQDRFLNCKAAKYRIRNGEMEEAEKVAGLFTRKDAPSPFEDLVEMQCLWFIQEEGDA
YTAKEDWARALRRYHQILDIFQEVEEDQYDFHAYCMRKYTLNAYVELLRFEDKLRDHPRF
ASAAKSAIEIYCRMHDSPSSFSVPQLPNGSATNGVSADEEEQEKKQAEEEEKARKEKEEA
EEKARKEAEEKEVAAAAAGGKKDKKKGKGKKPADKPATEEPAKKEPPKEEETAVALNVYH
DKDPLGAEHMSLALKDPLEQALRFLRPLERVKAKDVETWRLKAEVEVRRGKLLSAAQALR
TASSLDASAPSLLPTLVRLALAASSGTTEPAAVASALSSSLAALLGGSDVPLAPFVDAQL
QKNPANAEWLLQAAEAKRLLGAEHQDSAKELVLQLVKNDELKPTIKQLSHGMAFLTSVSA
SAADLDSFRTAAAQKYPLARAFKTAEELQAMDAKLAQETSEVTGEEEA