Protein Info for mRNA_1134 in Rhodosporidium toruloides IFO0880

Name: 9502
Annotation: K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 647 PF00899: ThiF" amino acids 9 to 454 (446 residues), 221.8 bits, see alignment E=1.4e-69 PF10585: UBA_e1_thiolCys" amino acids 333 to 393 (61 residues), 27.9 bits, see alignment 3.3e-10 PF14732: UAE_UbL" amino acids 468 to 541 (74 residues), 39.5 bits, see alignment E=1.1e-13

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (647 amino acids)

>mRNA_1134 K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B (Rhodosporidium toruloides IFO0880)
MAPATDRYSHTRAILGPQLFERVQDARLLVVGAGGIGCELIKNLVMSGFGTGERGLIEVL
DLDTIDLSNLNRQFLFQKQHVKRPKAVVAKETALKFNPHVHINALHRNIKDDEYNVDYFK
SFDFVMNALDNLDARRHVNKMCLAANIPLLESGTSGYVGQVQPIKRETTECFDCTGKPVP
KTFAVCTIRSTPSTAHHCIAWAKSYLFPQLFGADDEADQQELDDAEKNGENVEEIQELRK
EARAIRELRAGLNLEGAAKRVFEKVYVGDIERLLKMEDMWAHRKAPHTLNWEELSSAPST
SSSAPSTSESVNGTTAANGKDEARIKDQRKLSMKDSFDLFVDAVTRLSARFDPNGEPLSF
DKDDEDMLDFVVGAANLRAAAFDIESQTKFQVKEYAGNIIPAIATTNAIIAAALVHQALN
VLRSDWSAARTIWLKRTSQRIFDVSPLSAPNPHCAVCRVVYVPVKVVEDATLGELVRELV
GEGKAIPFEEFVSVQEGTRLLWETEDFEDNAEKTLKELGVKEGKFVTISDDEDHWPVQLC
IGSYLPASSSKRIVPDTSAIPSPIPTRAPPPAPEADSDSSDVEDLATVVEGAAATGAEAG
APGAKVVGKKRSADEAGLEGEGDEGKKKKVEYLVLDDEDGDVVIDLT