Protein Info for mRNA_1153 in Rhodosporidium toruloides IFO0880

Name: 9521
Annotation: K13513 LCLAT1, AGPAT8 lysocardiolipin and lysophospholipid acyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 461 transmembrane" amino acids 25 to 51 (27 residues), see Phobius details amino acids 60 to 81 (22 residues), see Phobius details amino acids 156 to 175 (20 residues), see Phobius details amino acids 403 to 420 (18 residues), see Phobius details PF01553: Acyltransferase" amino acids 113 to 267 (155 residues), 75.1 bits, see alignment E=4.3e-25

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (461 amino acids)

>mRNA_1153 K13513 LCLAT1, AGPAT8 lysocardiolipin and lysophospholipid acyltransferase (Rhodosporidium toruloides IFO0880)
MLHQQRLPLWAVPASSRPSRLLPTLHLTVAFVLLFDLGILTTFTLILLTLPFAYFPPTRL
AYLAAGKATFGRVLTLMVQWFSPTELVISAGEGIDAAKLMERDRDGRVRKVNLPTKGVWI
SNHTTLADWLYLWDFAYLADHSSSIYIALKSSLRKIPIIGWAASWFGFIFLERRWASDRA
PFRRQLKRIAQETNRGGADQKLALLIFPEGTIVTANTRGISSKFAEKTAVSDYKHVLLPR
STGLFFALRQLAPSIPNLSLVDLTVGYPLPRQPPPSDGKPVSPLYASDYYTLPSILLSHV
PPPELHIHVRAFPVSSIPLGDLSTMEHNPDDEGTEEEKRVFEEWLRKRWQEKDDLIERFR
TEGSFLKQPRSNGVKGAVEEDDDDERRPGEHVWPIRLRHPLEPLLAFSLFLPLLALYGIW
RGRWVAAGLLLSGVRYAFGRGGEAAATKSCGCGKMAVKTEL