Protein Info for mRNA_1226 in Rhodosporidium toruloides IFO0880

Name: 9594
Annotation: K01262 pepP Xaa-Pro aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 673 PF01321: Creatinase_N" amino acids 33 to 173 (141 residues), 63.8 bits, see alignment E=5.3e-21 PF16189: Creatinase_N_2" amino acids 194 to 371 (178 residues), 156.8 bits, see alignment E=1.1e-49 PF00557: Peptidase_M24" amino acids 375 to 594 (220 residues), 131.4 bits, see alignment E=7.6e-42 PF16188: Peptidase_M24_C" amino acids 606 to 670 (65 residues), 75.4 bits, see alignment E=6e-25

Best Hits

Predicted SEED Role

"Xaa-Pro aminopeptidase (EC 3.4.11.9)" (EC 3.4.11.9)

Isozymes

Compare fitness of predicted isozymes for: 3.4.11.9

Use Curated BLAST to search for 3.4.11.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (673 amino acids)

>mRNA_1226 K01262 pepP Xaa-Pro aminopeptidase (Rhodosporidium toruloides IFO0880)
MRISLRSSRLTRPAAHRFLNSPRRTMTFDSSARLAALREQMKNHELAAYIVDSGDAHSNE
YTAEADDRRSWISGFTGSAGTAIVLKDKAFLWTDGRYHQQASNQLSSGWTLMKHGVPSVP
SWTEWLTKPTHSSSLLPSGSKVGLDPALITIADYTTLAPALTSAGVELVPIRENLVDVAW
EAEVKEKSGGKEGKPQRPKNEVFVLEEKYAGEGAKSKIERVRKEMEKDDVFGGDVKAKSG
DKRCWGVVLTQLDEIAWLLNLRGSDISYNPVFFSWLVLPTASSSKPTLFIDIDQVPQKTY
EYLSGLGVLVEPYDSLIGFLEGVGGILGEQDLVLLPSRTNLASALALGLSRVVSSTRGPI
SDLKALKNDTEVQGFRQCHIRDGVALVRYFSWLERELKKGGELREYEAALKLEEFRKQLD
LFRGLSFSTISSTGGNASIIHYSPAPNGQSAVIDAFKIYLCDSGAQFSDGTTDVTRTLHY
GTPTTFEKRAYTRVLQGHIAIDQAVFPETATGYLLDPWARKALWQDGLDYRHGTGHGVGH
FLNVHEGPMGIGTRIAYNDVKLQPSQILSNEPGYYHEAGDESFGIRIENLVVVQPAQTPH
QYGGVKYNKMERLTMCPIATNLVEPSLMSLDEIDWLNKYNAEVLSKVGPLLRETGDSEAM
EWLERSCQPLSIV