Protein Info for mRNA_1263 in Rhodosporidium toruloides IFO0880

Name: 9631
Annotation: K06130 LYPLA2 lysophospholipase II

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 229 PF02230: Abhydrolase_2" amino acids 4 to 222 (219 residues), 193.1 bits, see alignment E=1.5e-60 PF03959: FSH1" amino acids 14 to 178 (165 residues), 35.7 bits, see alignment E=1.9e-12 PF12697: Abhydrolase_6" amino acids 17 to 169 (153 residues), 30.3 bits, see alignment E=1.6e-10 PF01738: DLH" amino acids 110 to 214 (105 residues), 27.7 bits, see alignment E=5.1e-10

Best Hits

Swiss-Prot: 46% identical to APTH1_CRYNJ: Acyl-protein thioesterase 1 (CNF02430) from Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565)

KEGG orthology group: None (inferred from 45% identity to pno:SNOG_07827)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (229 amino acids)

>mRNA_1263 K06130 LYPLA2 lysophospholipase II (Rhodosporidium toruloides IFO0880)
MASPTVLPSLQKHSATIIFLHGLGDSSAGWVPLAAALRQKKQFGHVKFVLPTAPVQPVTA
NGGYRMTSWFDIQDLGPAGLRAEDDVGMLSSVRSISSLISSEIDSGIPANCIVVGGFSQG
AVISYLTALTSERKLAGVVALSGFLGMAEKVKSMLSDHATSLPIFHGHGDADPVVQYKWG
QQTIAKLEELGFKSVEFKTYPRMGHSFCDEEQRDLERFLEKVLPAEPSS