Protein Info for mRNA_1271 in Rhodosporidium toruloides IFO0880

Name: 9639
Annotation: K05349 bglX beta-glucosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 862 PF00933: Glyco_hydro_3" amino acids 43 to 286 (244 residues), 166.2 bits, see alignment E=2.5e-52 PF01915: Glyco_hydro_3_C" amino acids 326 to 704 (379 residues), 188.4 bits, see alignment E=3.1e-59 PF07691: PA14" amino acids 414 to 541 (128 residues), 52.1 bits, see alignment E=1.3e-17 PF14310: Fn3-like" amino acids 765 to 840 (76 residues), 72.7 bits, see alignment E=4.4e-24

Best Hits

KEGG orthology group: K05349, beta-glucosidase [EC: 3.2.1.21] (inferred from 52% identity to cci:CC1G_03784)

Predicted SEED Role

"Beta-glucosidase (EC 3.2.1.21)" in subsystem Beta-Glucoside Metabolism or Fructooligosaccharides(FOS) and Raffinose Utilization (EC 3.2.1.21)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.21

Use Curated BLAST to search for 3.2.1.21

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (862 amino acids)

>mRNA_1271 K05349 bglX beta-glucosidase (Rhodosporidium toruloides IFO0880)
MAPLTLEEFAQADLHDVLARLTVKERISLLAGPDWWTTTPIPRIGVPSIKVSDGPNGVRG
SSHFRPTPAQTLPCATALGATFDVEAVEKMGKVLAHEAKAKGSSLLLAPTVNIQRNPLNG
RAFESFSEDPLLSGYLAAAYIDGLQKNGVGATIKHYVGNDQEHERLSVDVLIPERALREI
YLKPFEIAQRVAKPWSFMTSYSRVNSAHVSESKELLQDILRDEWKFDGLVMSDWHGTYST
DGAINAGLDLEMPGPTRWRGELVTHLLAAGKIEVEAINARAYAVLQAVQRSCQADLENVR
TNRRPEVPNDSQTDRDTCRAVSSDTIVLLKNERNVLPLKKSIKKLAVIGPNAKTRTVSGG
GSAYLTASYVVTPYEGIKEVAEKSGIEVQYEPGCYAHRYLPMLDGLIRTKAGGSGWTATF
YNEAIESNSPSIAVVDLLGTRIRINDQKPEGLADLFFLELEGYITPDESGPYDFGISLVG
RAQVFVDEKLVVDNGWTTKQTPGPSFYGLGTVEEVGTVAVQAGKTYKIVVRYTNHPREEE
GGQKQPSLMMAALRLGGAPRIQEDESIEHAVKLAGGSDAVVVVIGTNMDWEAEAADRASL
ALPGRTDELVSRVLAANPNAIIVNQSGSAVAFPWIDAAATVVQAWFGGNCAGQAIADVLF
EGGVNPSGRMPLSFPYRIEDCTAHLNWGSESGKVLYGEGIFVGYRGYEETARSPMFAFGE
GLSYTSFEWFQLSATLATARPSSATELSISISLRVRNTGNIAGRDVVQIYVLPPSTSTYR
RPARELKGFVKTRLLAPGQEETVKLELPKEALAYWRDSKDSKNGWVAEKGEYTVAAQRSS
REVDVVETVRVRLNSTVYWRGL