Protein Info for mRNA_1359 in Rhodosporidium toruloides IFO0880

Name: 9727
Annotation: K06018 PPN1 endopolyphosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 716 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF00149: Metallophos" amino acids 44 to 399 (356 residues), 25.2 bits, see alignment E=1.1e-09

Best Hits

Predicted SEED Role

"Endopolyphosphatase (EC 3.6.1.10)" (EC 3.6.1.10)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.1.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (716 amino acids)

>mRNA_1359 K06018 PPN1 endopolyphosphatase (Rhodosporidium toruloides IFO0880)
MFSSLILPLLLAASSTSSTPLTSATPSPSTRAHGSVAARPLKGRFIHITDVHPDPFYRTG
ASEDEACHFKEKRKKKKGKGKEGKGSAAGVDGWSVADQVEADEEEELDALVKPDGARDAG
YWGLPVSDCDTPLSLVNATFDWLEKHFKGEVDFVVWTGDNARHDIDSRLPRSLPEIFDLN
RFVVDRVRSAFGKDVPIVASIGNNDIYPHNVLAPGPNKITSEYLSIWHSFIPEHFLHTFA
RGGYYSVEAIKGDLLLVSLNTLYFYSRNSIVDGCPPFDEDFAPWRTAQGGANASNRAYLD
PSLHPSSAAAASLFQSHVSSLTSPSSSPSSSNVRDIDPGTEQLLWLEQQLTLARARGMQV
WLTGHVPATRENWYEGCYQRYAELVLAWQDTVVGQLFGHMNVDFFSFLQDSDTSQPSASS
SSSRSPPAPNDLRTLSSSLLSSTYSLYSHLPPQHKTREKDFAPVYVSPSVIPTYLPGVRV
WEYNTTGGGREMRRMIREEQDADLEEDVESWVDRVRAWAGRRGKKGRRGGKGKGRSKRPP
RNPDRPPRPPRHSSPHAPARKNTYLTPLSYTQYYLSLEALEEANAAAAEVANGNKSETEP
PKWELMYTTLSTTELARRLSRQSSSSAERDPLFPSSLLPPPIRTLLSSPSTPSRTHRLRR
MLHSLNLTPYDGVLSSGEGLTVKALLRVARWVTEGKKGGKRWEAFRWRMGVGSGEL