Protein Info for mRNA_1404 in Rhodosporidium toruloides IFO0880

Name: 9772
Annotation: KOG2504 Monocarboxylate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 486 transmembrane" amino acids 96 to 114 (19 residues), see Phobius details amino acids 137 to 156 (20 residues), see Phobius details amino acids 165 to 184 (20 residues), see Phobius details amino acids 191 to 211 (21 residues), see Phobius details amino acids 223 to 243 (21 residues), see Phobius details amino acids 255 to 276 (22 residues), see Phobius details amino acids 297 to 318 (22 residues), see Phobius details amino acids 331 to 350 (20 residues), see Phobius details amino acids 359 to 379 (21 residues), see Phobius details amino acids 386 to 406 (21 residues), see Phobius details amino acids 425 to 446 (22 residues), see Phobius details amino acids 452 to 476 (25 residues), see Phobius details PF07690: MFS_1" amino acids 104 to 413 (310 residues), 71 bits, see alignment E=4.6e-24

Best Hits

KEGG orthology group: None (inferred from 41% identity to pcs:Pc22g01770)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (486 amino acids)

>mRNA_1404 KOG2504 Monocarboxylate transporter (Rhodosporidium toruloides IFO0880)
MSTSPHAGLSADPHDRHPHPHHLAERLPPINFEPASSEHTVAESAGEATGAASEKGGATS
HGGIEADAAGTTVGDAEKGLASAPVVPDFPDGGLRAWSVVAGAWCISFTSWGYTNAFGVF
QTYYQDNQLRDYTSSDISWIGSLQLAMVLACAILAGKAFDAGYIKYLLSAAVLFYTAGMF
GFASATKYWQIFLGQGIACGLAAGIAFIPAASSVSHWFRRRRATALGVLATGSSIGGIVY
PIMINHLFPKIGFVWTVRAVAFLTVGLVIIATLTINSRLPPRKVERIFDFRPLREKGFLL
VTIGEAIIMWGLYTPYFFIQDYALKYGISSNLALYSLSILNAASVFGRIIPNWLADTYGP
LTILTPQCFLSGILIFLFIPMCKNTAGLVVFTILFGFSSGAYVSMMPATVASLTVNMNEL
GHRTATMFLIVSVFALTGTPISGALVHHDPTYVGAFCFAGACVIVGSCLNLWAWFVVSKQ
KGTRWV