Protein Info for mRNA_1414 in Rhodosporidium toruloides IFO0880

Name: 9782
Annotation: K19801 PI4KB phosphatidylinositol 4-kinase B

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1270 transmembrane" amino acids 180 to 198 (19 residues), see Phobius details amino acids 794 to 815 (22 residues), see Phobius details amino acids 1105 to 1120 (16 residues), see Phobius details PF00454: PI3_PI4_kinase" amino acids 1000 to 1210 (211 residues), 113.9 bits, see alignment E=5.7e-37

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1270 amino acids)

>mRNA_1414 K19801 PI4KB phosphatidylinositol 4-kinase B (Rhodosporidium toruloides IFO0880)
MSRATALESGGGSGSALLLRLFESSFFDVHLAIGYLKTYPNSIGITHYLINRLRSFEYED
VEFYWPQLCYLAITRPSPSTALENFILERCQEDAHIAVITLWYLQASLSDLAAMPKSDQF
AACRRILNRVQEIIFSDPPLPSSAASSSSTSTKTPSPSVPNDKATQEAEEKQEKINAPTA
SFVGIGLLLAAIGMPQLVNVAGRMVVEQGRRIEPPTRDEVDDAEEEEVREGGNSESGSEG
EAGVAKAVAAKKAKTGIAGALLNGSAKGSKKATGSSASKPTKRSQTQPNYLPGDRITASP
RIPLPSAHESRSMSFLPSPSAKSPTKPTPSSPSTNSTSPLSPLERRGSLKHSVLRQSTAP
SLSVPSLPMTSKSASNLLNSPSSTSQHLSGTTMPGYGLPKNFLSRHLLLQACRSQLDLIR
SLQDISTRLVLVPKPARLSSLRAELTVLNHGLPRGCSLGMSTRPPPVALLPDSTPKPPAS
SPQPSSPFDKPHPPTPRRKQARVVRISPGESVVLNSADRAPFVIYVEVLEEDLDFDPDRR
SNWEDLRRALREREGLATASIGAKGKALAENGRLSLESGMDGYAKQADAPSPSKSQEAPA
TPHQPTSPSPGTPFAERAEYALGGGLDGGGPSEGDVTAEPAGEMDLVEQLYGDISLRDDP
LAEPPVEEVEEEIHNRDVDEAAWRRKDEAAKAKRRDRTASTASSNTARSRTSISSASGEP
LPVGPKAARRMSGGTARPGGRSIASRAPISLEDYAERMRMAAIMLAQLDASQTASRGVVG
AGTAAAGTLVTLPVYTVAGIGGVVGAGLGAGLGAVKARLSKKETLAASAGQGGAGTRASL
DTASAAEGTSAVAGQPPLNPVAAALSHGAAEASSSSGSAPSTSTATTGTSGSSTPAPLPT
QRPRVLAPQDAAAIRDRIMSEMMALEEERMERMRGDVESRSGWTAAAGSAKTQDNTVVMR
AVNKDDPSGAVFAESFTSKTARIRSASPFGHLPTWSLLSCIVKTGADLRQEQLAVQLISE
FGRIWKEENCPGWVYYFRMIVTSENSGLIETINDAVSVHSLKKNAYARRAEDGTQAFDSY
SLYDHFVNTYGSPDSSKYRKAQDAFIQSLAAYSVICYLLQLKDRHNGNILLDRQGHLIHI
DFGFMLSNSPGSIGFEMAPFKLPQDYIDILGGFDSPKFAEFRALFKRCFRDARKHAERII
TLVELMQKDSSLPCFSNGELTSQQLRERFMLSLPQAQLDEYADKLILNSAQSSFTRLYDL
FQGYSNGILI