Protein Info for mRNA_1433 in Rhodosporidium toruloides IFO0880

Name: 9801
Annotation: K17081 PHB2 prohibitin 2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 320 transmembrane" amino acids 45 to 68 (24 residues), see Phobius details PF01145: Band_7" amino acids 69 to 238 (170 residues), 82.7 bits, see alignment E=1.7e-27

Best Hits

Swiss-Prot: 64% identical to PHB2_YEAST: Prohibitin-2 (PHB2) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

KEGG orthology group: None (inferred from 71% identity to cne:CNA00070)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (320 amino acids)

>mRNA_1433 K17081 PHB2 prohibitin 2 (Rhodosporidium toruloides IFO0880)
MAGRGPSFAELGARYLRQRAGAFGQGGGPRPGGGGNGGGGPGLGAMLGGAGGVVALAVGG
LAINASLFNVDGGHRAVKYTRLHGVTEEVYNEGTHIAVPWFETPIIYDVRSKPRSIASLT
GTKDLQMVNITCRVLCRPRVDALAKIYTELGANYDEVVLPSIVNEVLKSVVAQFNASQLV
TQREMVSKLVRDNLERRAGRFNLILDDVSITHVTFSPAFSEAVEAKQIAQQTAQRAAYLV
DQALQEKQSIIVKAQGEARSAELIGEAVKQNKGFLELRKMEAAREIAGLVSNSGNKLMLD
SDALLLNCASLSCALLSAAY